Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1389 |
Symbol | |
ID | 5057842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1558283 |
End bp | 1559209 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640473658 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001158234 |
Protein GI | 145593937 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAGTG ACCTCCCTGA CAGTCCCCTC CGGGTGGCCT CCCGGCCGTT CGGGCGGGTG CTCACGGCCA TGGTGACGCC CTTCACCGCC GAGGGTGCGC TCGACCTGGA CGGTGCGACG CGGTTGGCGA ACTACCTGGT TGATGAGCAG GGCAACGACG CGCTGGTGGT CAACGGCACC ACCGGCGAGT CGCCGACCAC GACGGACGCG GAGAAGGAAC GCCTGATTCA GACGGTCGTC GCGGCCGTCG GTGACCGAGC CAAGGTGGTG GCCGGGGTCG GGACCAACGA CACCCGGCAC ACGATCGAGC TGGCCGCCGG CGCGGAGAAG GCCGGTGCAC ACGGTCTGCT GGTGGTGACG CCGTACTACA GCAAGCCGCC GCAGGAGGGC TTGGTGCGAC ACTTCACCGC GGTGGCCGAT GCCGGTGGGC TGCCGGTGAT GCTCTACGAC ATTCCACACC GTGCCGGGGT AGCGATCGAG ACCGAGACGC TCGTGCGCCT GGCCGAGCAC GGCCGGATCG TCGCGGTGAA GGACGCCAAG ACCGACCTGA CCGCCACCAG CTGGGTGACC AGCCGGACCG GTATGGCCTT CTACAGCGGC GAGGATTCAC TCACCCTGCC CGCGCTGGCG GTCGGGGCGG TCGGAGTGGT TGGCACGTCA ACCCACTTCA CCGGGGCGCG GACCCAGGAG ATGATCCGGG CGTTCGACGC GGGGGACAAC ACCACGGCGC TCGCCCTGCA CCGCCAGCTG CTGCCGCTGT ACACGGGCAT TTTCCGGACT CAGGGCGTGA TCCTGGTCAA GGCCGGCCTG GCGGCGAAGG GACTCCCCGC TGGCCCGGTC CGTTCCCCGC TGGTCGACGC GACCGTCGAC CAGCTTGCCC AGCTCCGCGT CGACTGCGCG GCGGCGGGCC TGGACCTCCC TGAATGA
|
Protein sequence | MTSDLPDSPL RVASRPFGRV LTAMVTPFTA EGALDLDGAT RLANYLVDEQ GNDALVVNGT TGESPTTTDA EKERLIQTVV AAVGDRAKVV AGVGTNDTRH TIELAAGAEK AGAHGLLVVT PYYSKPPQEG LVRHFTAVAD AGGLPVMLYD IPHRAGVAIE TETLVRLAEH GRIVAVKDAK TDLTATSWVT SRTGMAFYSG EDSLTLPALA VGAVGVVGTS THFTGARTQE MIRAFDAGDN TTALALHRQL LPLYTGIFRT QGVILVKAGL AAKGLPAGPV RSPLVDATVD QLAQLRVDCA AAGLDLPE
|
| |