Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1385 |
Symbol | |
ID | 5057838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1554215 |
End bp | 1555453 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640473654 |
Product | hypothetical protein |
Protein accession | YP_001158230 |
Protein GI | 145593933 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.488241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGG GTGCCAGGCG GACGGTCAGA CAGGTGATCG GTGTGGCCGG GCTCGCCGTC GGGGTGGCCC TCTTCCTGTC CGTGGCGGCC ATGCGGCATG GGTTTTTTGA CCTCGGGGTC TACTACGGCG CGATCCGTTA CTGGGTGCAC GACGGCGGAG AGATCTACGA CTTCCTGCGC CCGTTCACCC AGTACGGCTT CACCTACCCG CCGTTCGCAG CCCTGGTCAT GCTGCCGATG GCGTACGTCT CCTGGACGGT GGCGATCGTG CTGAGCGTCT CCGCGAGCGT GGCGGTCACC CTGGTGCTGT TCTGGTGGCT GCTTGACCCG ATCTCGCGCC GTGCCGGCTG GACCCGCTGG TTCGCCATCG CGGTAGCGCT CTGCCTCGCC GCGGCGTACG AGCCGATGCG GGAGACAGTG AACTTCGGCC AGGTCAACAT GCTGTTGCTG TTCCTGGTGG CGGTGGATCT GCTTCGGCTA CTGCCGTCCG GCAGCCGATG GGCCGGCGCC ACCATCGGCC TGGCCACCGC GATCAAGCTG ACCCCGGGGA TCTTCATCGT CTACCTGCTG GTGACCGGGC GCTGGCGGGC GGCGGTAACC GCGATGGGCA CCGCCGCCGG CGCCACCCTG CTCGCCGCCG CCCTCTTCCC GAATGCCTCC CGGGAGTTCT GGACCGAGGC GCTGTGGAAC ACCAACCGCG TGGGTGAGCT CTCCTTCGTC TCCAACCAGT CACTGCGTGG GGTGGTGGCC CGGCTGAACC CGGAGGATCC GAGCACCGTC GTCTGGCTGG TGCTGGTGGT GGCCGTACTG GCGCTCTGGA CGTGGCGCGC CCGGTCTGCG GTGGCGGCCG GTGACGAGGC GACCGGGCTG GCGTTGACCG GTGTGCTGAT GTGTCTGATC AGCCCGATCA CCTGGGTGCA CCATCTGGTC TGGTTGCTGC CGGCGCTCAT CCTGTTGGTG GACAACGCGA TGGCCGCGCC CGCCGGTAGC CATCGGCGCC GTCGGCTGCT GGTTGTCGTG AGTGTCGCGT ACGCGTTCCT GATCAGCCGG ATCGTGTGGG CCTGGGAGCG GGACTTCACC GGGATTGACG GCTTCCTCGG CAGCAACGTG TACGTCTGGA TCAGCCTGGC GCTGCTGGCG TTTCTCCCGA TCCGGCCCGC GGTGGACCGG GCCGCGGTCG AGGTTGCCGG GCCGGACGAG GGCAGCCGGG CCCGGACCGG TGTCGTACCC GTGACCTAG
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Protein sequence | MAQGARRTVR QVIGVAGLAV GVALFLSVAA MRHGFFDLGV YYGAIRYWVH DGGEIYDFLR PFTQYGFTYP PFAALVMLPM AYVSWTVAIV LSVSASVAVT LVLFWWLLDP ISRRAGWTRW FAIAVALCLA AAYEPMRETV NFGQVNMLLL FLVAVDLLRL LPSGSRWAGA TIGLATAIKL TPGIFIVYLL VTGRWRAAVT AMGTAAGATL LAAALFPNAS REFWTEALWN TNRVGELSFV SNQSLRGVVA RLNPEDPSTV VWLVLVVAVL ALWTWRARSA VAAGDEATGL ALTGVLMCLI SPITWVHHLV WLLPALILLV DNAMAAPAGS HRRRRLLVVV SVAYAFLISR IVWAWERDFT GIDGFLGSNV YVWISLALLA FLPIRPAVDR AAVEVAGPDE GSRARTGVVP VT
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