| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1382 |
|---|
| Symbol | |
|---|
| ID | 5057835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1551253 |
|---|
| End bp | 1552653 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640473651 |
|---|
| Product | peptidase M16 domain-containing protein |
|---|
| Protein accession | YP_001158227 |
|---|
| Protein GI | 145593930 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.975318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCGGG CTGTCTCCGT ACCGTCCAGA CCGGAACGAC GGGGGGTGGC GGCGTTTCGG
GGCGCCGCCG GCCGTGCCGT AACCCGCACG CTCAGCGACG ACCCGCTGGG CGGTACGGTC
CGACGGACTG TGCTGCCCAG CGGGCTGCGG GTACTCACCG AGGCGATCCC GGCGATGCGC
AGCGTCTCGT TCGGCATCTG GGTGTCCGTT GGCTCCCGGG ACGAGACCGG CCCCCAGTCC
GGTGCCGCCC ACTTCCTTGA GCACCTGCTG TTCAAGGGGA CGCACCGGCG GACAGCGCTG
GAGATCTCGT CGGGGATCGA GGCGGTCGGC GGCGAGACTA ACGCCTTCAC CACGAAGGAG
TACACCTGCT ACTACGCGCG GGTGCTCGAC GAGGATCTAC CCCTCGCCAT CGACGTGATG
TGCGACCTGG TCGCCGACTC GGTGCTGACC CCGGAAGACG TGGAGGTCGA GCGGGGCGTG
ATCCTCGAGG AGATCGCCAT GCACGACGAC GAACCCGGCG ACGAGGTGCA CGACCTCTTC
GCCCGGGCCG TCTACGGCGA GCACCCGCTC GGCCGGCTGA TCTCCGGGAC GGAGCAGACG
GTCACCCCGA TGACCCGGCG GCAGATCCAG GGCTTCTACC GACGGCACTA CACCGCACCA
CGGATCGTCA TCGCCGCCGC GGGGAACCTT GACCACTCCA GCGTGGTCAA GCTGGTCCGG
CAGGCGCTGC GGGGCTCGCC ACTGGACACC GATCCGGCGG CGCCCGCACC GTACCGGAGC
GCCACCCCGG TGGTACGGAC GAAGCCCGCG ACCACCCTCG TCGGGCCGAA GGAGACCGAG
CAGGCGCACG TTGTGCTCGG CTGTAGCGGC ATCGATCGGC GTGACGAGCG CCGGTTCGCC
CTCGGGGTGT TGAACAACAT CCTCGGCGGC GGCATGTCCA GCCGGCTCTT CCAGGAGATC
CGCGAGCAGC GGGGGCTCGC CTACTCGGTC TACTCCTACG CCAGCCAGCA CGCCGACAGC
GGCCTGTTCT CCGTCTACGC CGGCTGCGCG CCGGGCCGAG CCAACGAGGT GTTGGAGCTG
ATCCGCGCGG AGTTGGCCCG GGTGGCCGCC GACGGGCTCA CGGCGGCCGA GTTGGCCCGG
GGCAAGGGCA TGAGCAAGGG CGGGTTCGTG CTGGGCCTGG AGGACAGCGG CTCCCGGATG
AGCCGGCTGG CCAAGGGGGA GCTGCTCTAC GGCGAACTGA TGCCGGTCGA CACCTTGCTG
GCCCGGGTGG ACGCGGTCAC CGTTGCCGAC GTGAACACGC TTGCCGCGGA GTTGCTGAGC
CGCCCGATGT CGCTGGCGGT GGTGGGTCCG TTCGGCGAGT CCGACTTCAC CGTCGGAGCG
GCCCCCACCA CCCCCGCCTG A
|
|---|
| Protein sequence | MSRAVSVPSR PERRGVAAFR GAAGRAVTRT LSDDPLGGTV RRTVLPSGLR VLTEAIPAMR
SVSFGIWVSV GSRDETGPQS GAAHFLEHLL FKGTHRRTAL EISSGIEAVG GETNAFTTKE
YTCYYARVLD EDLPLAIDVM CDLVADSVLT PEDVEVERGV ILEEIAMHDD EPGDEVHDLF
ARAVYGEHPL GRLISGTEQT VTPMTRRQIQ GFYRRHYTAP RIVIAAAGNL DHSSVVKLVR
QALRGSPLDT DPAAPAPYRS ATPVVRTKPA TTLVGPKETE QAHVVLGCSG IDRRDERRFA
LGVLNNILGG GMSSRLFQEI REQRGLAYSV YSYASQHADS GLFSVYAGCA PGRANEVLEL
IRAELARVAA DGLTAAELAR GKGMSKGGFV LGLEDSGSRM SRLAKGELLY GELMPVDTLL
ARVDAVTVAD VNTLAAELLS RPMSLAVVGP FGESDFTVGA APTTPA
|
|---|
| |