| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1352 |
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| Symbol | ispG |
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| ID | 5057805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1518099 |
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| End bp | 1519271 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473621 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001158197 |
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| Protein GI | 145593900 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.964286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.816365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCTG TCAGTCTCGG TATCCCCGCC GTACCGCCGC CGCCGCTCGC GCCCCGTCGC
GCGAGCCGTC AGATCATGGT CGGTTCGGTG CCGGTCGGTG GGGGCGCGCC GGTGTCGGTG
CAGTCGATGA CCACCACGCT CACCGCCGAC GTGAACGCCA CGCTCCAGCA GATCGCCGAG
CTGACCGCCG CCGGCTGCCA GATCGTTCGG GTCGCCGTAC CGAGCCAGGA CGATGTCGCG
GCGTTGCCGG CGATCGCCCG CAAGTCGCAG CTCCCGGTGA TCGCCGACAT CCACTTCCAG
CCCCGGTACG TCTTCGCCGC GATCGAGGCC GGCTGCGCGG CGGTACGGGT GAACCCGGGC
AACATCCGGC AGTTCGACGA CAAGGTCAAG GAGATCGCGA AGGCAGCCGG TGACGCGGGC
GTACCGATCC GGATCGGCGT GAACGCGGGC TCGCTGGACA AGCGACTGCT GGCCAAGCAC
GGCAAGGCGA CCGCGGAGGC GCTGGTCGAG TCGGCGCTGT GGGAGTGCTC GCTCTTCGAG
GAGCACGGCT TCCGGGACAT CAAGATCTCG GTGAAGCACA ACGACCCGGT GGTGATGGTC
CGGGCCTACC GGCAGCTCGC CGAGGCGTGC GACTACCCGC TGCACCTCGG GGTCACCGAG
GCCGGGCCGG CGTTCCAGGG CACCATCAAG TCGTCGGTGG CCTTCGGCGC GCTGCTCGCC
GAGGGGATCG GGGACACCAT CCGGGTGTCG CTCTCCGCTC CGCCGGTAGA AGAGATCAAG
GTCGGCGCCG CGATCCTGGA GTCGCTCGGC CTGCGCGAGC GCGGTCTGGA GATCGTCTCC
TGCCCGTCCT GCGGCCGGGC CCAGGTCGAC GTGTACAAGC TCGCCGAGGA GGTCACCGCC
GGCCTGGAGG GGCTACCGGT GCCGCTGCGG GTCGCCGTGA TGGGCTGCGT CGTCAACGGC
CCCGGTGAGG CGCGGGAGGC CGACCTGGGG GTGGCCTCCG GCAACGGCAA GGGCCAGATC
TTCGTCAAGG GCCAGGTCAT CAAGACCGTC CCGGAGGGTC AGATCGTGGA GACCCTCATC
GAGGAGGCGC TCCGCCTCGC CGAGGAGATG GGTGCCGAGC TCCCCGAGGA GCTGCGGAGC
CTGGCCGGCG GCGCCACCGT GACCGTGCAC TGA
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| Protein sequence | MTAVSLGIPA VPPPPLAPRR ASRQIMVGSV PVGGGAPVSV QSMTTTLTAD VNATLQQIAE
LTAAGCQIVR VAVPSQDDVA ALPAIARKSQ LPVIADIHFQ PRYVFAAIEA GCAAVRVNPG
NIRQFDDKVK EIAKAAGDAG VPIRIGVNAG SLDKRLLAKH GKATAEALVE SALWECSLFE
EHGFRDIKIS VKHNDPVVMV RAYRQLAEAC DYPLHLGVTE AGPAFQGTIK SSVAFGALLA
EGIGDTIRVS LSAPPVEEIK VGAAILESLG LRERGLEIVS CPSCGRAQVD VYKLAEEVTA
GLEGLPVPLR VAVMGCVVNG PGEAREADLG VASGNGKGQI FVKGQVIKTV PEGQIVETLI
EEALRLAEEM GAELPEELRS LAGGATVTVH
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