Gene Strop_1305 details

Gene Information

• Locus tag: Strop_1305
• Symbol: rpsP
• ID: 5057758
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora tropica CNB-440
• Kingdom: Bacteria
• Replicon accession: NC_009380
• Strand: +
• Start bp: 1470891
• End bp: 1471355
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640473577
• Product: 30S ribosomal protein S16
• Protein accession: YP_001158153
• Protein GI: 145593856
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0228] Ribosomal protein S16
• TIGRFAM ID: [TIGR00002] ribosomal protein S16

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 0.951673
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGCCGTAA AGATCCGGCT CCTGCGGATG GGCAAGATCC GCAACCCGCA GTACCGCATC 
GTCATCGCCG ACTCGCGCAC CAAGCGTGAC GGCCGGGCGA TCGAGTTCGT CGGGATCTAC 
CAGCCGAAGC ATGACCCTTC GGTGATCGAG GTCAAGTCGG ACCGGGTGCA GTACTGGCTC 
TCCGTGGGCG CGCAGCCGAG CGAGGCGGTG CAGCGCCTGC TGGAGAAGAC CGGCGACTGG 
CAGAAGTTCA AGGGCCTGCC GGCTCCCGAG CCGCTGAAGG TCGCGCCCGA GCGGGTCGAC 
CGCAAGGCGG CCTACGAGGC TGAGGCGAAG GCCGCCGCCG GTCTGGCGGA GGCCCCGACC 
AAGCCGGCCA AGAAGGCCGC CAAGGCCGAG GCGGCGCCGA AGACCGACGA GGCGGCGCCG 
AAGACCGAGG AGCAGGCCGG TGCGGGCTCC GGCGAGCAGG GCTGA 

 

Protein sequence

MAVKIRLLRM GKIRNPQYRI VIADSRTKRD GRAIEFVGIY QPKHDPSVIE VKSDRVQYWL 
SVGAQPSEAV QRLLEKTGDW QKFKGLPAPE PLKVAPERVD RKAAYEAEAK AAAGLAEAPT 
KPAKKAAKAE AAPKTDEAAP KTEEQAGAGS GEQG