Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1284 |
Symbol | |
ID | 5057737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1444736 |
End bp | 1445299 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640473556 |
Product | hypothetical protein |
Protein accession | YP_001158132 |
Protein GI | 145593835 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAGC ACACACCTGA ACCACTCGAC CCCAGGTCGC CGCTGGTCCT CGACACGAGG GACCTGCCGC GCCGGCCTGG CGCGTTGCGT ACGGTCCGGC GTGCGGCGGC GGCACCGGCG GACCTCGGCG TGGAGTTGAT CGGCGTGCCG GCGGGTGCTG ATCTCGACCT CGACCTGAGG TTGGAGTCGG TATCCGAGGG CGTGCTCGTC TCTGGGACCA TCAGTGGCCC CATCAAAGGC GAGTGCAGCC GCTGTCTGCG CGAGATCGAC GACGTCGTGG CCGTCCCGGT CCAGGAGCTG TACGCGTACG AGAACAGCAC CACGGACATG ACGGCCGACG AGGACGAGGT GGGCCGGATG CAGGGCGATC TGATCGACCT GGAGCCGGTG CTGCGGGACG CGGTGGTGTT GACGCTGCCG ACCAACCCGC TCTGCCGGGA GGACTGCCCA GGCCTGTGCC CCGACTGCGG GGTGGGCTGG GCTGAACTAC CGGCCGATCA CAGCCACCAG CAGGTCGACC CGCGTTGGGC GGCCCTGTCG CAACTGACCC GTAAAGAGGA GTAA
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Protein sequence | MPKHTPEPLD PRSPLVLDTR DLPRRPGALR TVRRAAAAPA DLGVELIGVP AGADLDLDLR LESVSEGVLV SGTISGPIKG ECSRCLREID DVVAVPVQEL YAYENSTTDM TADEDEVGRM QGDLIDLEPV LRDAVVLTLP TNPLCREDCP GLCPDCGVGW AELPADHSHQ QVDPRWAALS QLTRKEE
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