Gene Strop_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1284 
Symbol 
ID5057737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1444736 
End bp1445299 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content69% 
IMG OID640473556 
Producthypothetical protein 
Protein accessionYP_001158132 
Protein GI145593835 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGC ACACACCTGA ACCACTCGAC CCCAGGTCGC CGCTGGTCCT CGACACGAGG 
GACCTGCCGC GCCGGCCTGG CGCGTTGCGT ACGGTCCGGC GTGCGGCGGC GGCACCGGCG
GACCTCGGCG TGGAGTTGAT CGGCGTGCCG GCGGGTGCTG ATCTCGACCT CGACCTGAGG
TTGGAGTCGG TATCCGAGGG CGTGCTCGTC TCTGGGACCA TCAGTGGCCC CATCAAAGGC
GAGTGCAGCC GCTGTCTGCG CGAGATCGAC GACGTCGTGG CCGTCCCGGT CCAGGAGCTG
TACGCGTACG AGAACAGCAC CACGGACATG ACGGCCGACG AGGACGAGGT GGGCCGGATG
CAGGGCGATC TGATCGACCT GGAGCCGGTG CTGCGGGACG CGGTGGTGTT GACGCTGCCG
ACCAACCCGC TCTGCCGGGA GGACTGCCCA GGCCTGTGCC CCGACTGCGG GGTGGGCTGG
GCTGAACTAC CGGCCGATCA CAGCCACCAG CAGGTCGACC CGCGTTGGGC GGCCCTGTCG
CAACTGACCC GTAAAGAGGA GTAA
 
Protein sequence
MPKHTPEPLD PRSPLVLDTR DLPRRPGALR TVRRAAAAPA DLGVELIGVP AGADLDLDLR 
LESVSEGVLV SGTISGPIKG ECSRCLREID DVVAVPVQEL YAYENSTTDM TADEDEVGRM
QGDLIDLEPV LRDAVVLTLP TNPLCREDCP GLCPDCGVGW AELPADHSHQ QVDPRWAALS
QLTRKEE