| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1236 |
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| Symbol | |
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| ID | 5057686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1397542 |
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| End bp | 1399137 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473505 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001158084 |
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| Protein GI | 145593787 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.276789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGG TCGTACTGAT CGCCGAAGAA CTCGCCCCCG CCGCCATCGA GGTGCTCGCC
CACGACTTCG ACGTCCGACA TGTGGACGGC ACCGACCGCC CGACCCTGCT TTCGGCGCTC
TCCGAAGCTG ACGCTGTCAT CGTCCGCAGT GCGACCCGAA TCGACGCCGA GGCGATCGCC
GCGGCACCGC GGCTCAAGGT GGTCGCCCGG GCCGGTGTCG GCCTGGACAA CGTCGAGGTG
CCGGCGGCCA CCACCCGCGG TGTCATGGTC GTCAACGCCC CCACCTCCAA CATTGTCTCC
GCGGCCGAGC AGGCGGTCGC CCTCCTGCTC GCCGTCGCGC GTAACACCGC CAGCGCCAGC
ACGGCGCTGA AGGTGGGGGA GTGGAAGCGG TCGAAGTACA CCGGCGTGGA GGTACAGGGC
AAGACCGTCG GGGTGGTCGG CCTCGGGCGT ATTGGTGTCC TCTTCGCGCA GCGGATCGCC
GCGTTCGGTA CCCGGTTGAT CGCCTATGAC CCGTACATCC AACCGGCGCG GGCCGCGCAG
CTCGGCGTCC GCCTCGTCGG CCTGGAGGAG CTGCTGCGCC AGAGCGACTT CATCTCCATC
CACCTGCCGA AGACGTCGGA GACGGTGGGT CTGATCGGGG AGAAGGAGCT GGCGATCGTC
AAGCCCGGGG TGCGGATCGT CAACGCCGCC CGGGGCGGCC TCGTGGACGA GCAGGCCCTC
GCGGACGCGA TCGCTGAGGG GCGGGTCGCT GGGGCCGGCG TTGACGTGTA CGCCAAGGAG
CCCTGCACCT CATCGCCGCT GTTCGCCTTC GACAACGTGG TGGCGACCCC GCACCTGGGC
GCCTCCACGC ACGAGGCGCA GGACAAGGCG GGCCTCGCCG TGGCCCGCAG CGTGAAGCTG
GCGTTGCAGG GTGAGTTCGT GCCGGACGCG GTGAACGTGC AGACCGGTGG CGTGGTCGCC
GAGGATGTCC GGCCGCTGCT GCCGCTGGCC GAGAAGCTCG GCCGGGCCTT CACCGCGGTG
GCCGGCGGGA TCGCCGCGAG CGTGACCGTT GAGGTGCGGG GCGAGGTGGT CAGCAACGAT
GTCTCGGTGC TCAAGCTCGC GGCGACCAAG GGGCTGTTCA GCTCGGTGGT GGAGGAACAG
GTCACCTACG TCAACGCCCC GCATCTGGCG GCCGAGCGGG GGGTCGAGGT GTCGCTGGCT
ACCAGGCCCG AGACGGCCGA CGGACCGGTG CTGGTCACCA TCCGGGGCGC CCTGCCCGAC
GGCCGGACGG TGAGCGTCTC CGGCACCAGC GTCACCGGTG CCCGGGACGT CAACAAACTG
ACCGAGGTGG ACGGCTTCGA CGTGGAGATC GGGGCGGAGG GCATCCTCGT CTTCCTCCGT
TACGCCGACC GGCCGGGTGT TGTCGGCGCG GTCGGCACCC TGCTTGGCGA GGCCGGCGTC
AACATCGCGG CGATGCAGGT GGCCCGTCGG GAGGCCGGTG GGGAAACGCT GATGACCCTC
ACCGTTGACC AGGCCCTCGG AGCCGACCTC CTCACCTCCG TCGCCGATTC GGTCGGTGCG
ACCTCGGTCA GCGCTGCCGA CCTGCGCGAC GAGTGA
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| Protein sequence | MNPVVLIAEE LAPAAIEVLA HDFDVRHVDG TDRPTLLSAL SEADAVIVRS ATRIDAEAIA
AAPRLKVVAR AGVGLDNVEV PAATTRGVMV VNAPTSNIVS AAEQAVALLL AVARNTASAS
TALKVGEWKR SKYTGVEVQG KTVGVVGLGR IGVLFAQRIA AFGTRLIAYD PYIQPARAAQ
LGVRLVGLEE LLRQSDFISI HLPKTSETVG LIGEKELAIV KPGVRIVNAA RGGLVDEQAL
ADAIAEGRVA GAGVDVYAKE PCTSSPLFAF DNVVATPHLG ASTHEAQDKA GLAVARSVKL
ALQGEFVPDA VNVQTGGVVA EDVRPLLPLA EKLGRAFTAV AGGIAASVTV EVRGEVVSND
VSVLKLAATK GLFSSVVEEQ VTYVNAPHLA AERGVEVSLA TRPETADGPV LVTIRGALPD
GRTVSVSGTS VTGARDVNKL TEVDGFDVEI GAEGILVFLR YADRPGVVGA VGTLLGEAGV
NIAAMQVARR EAGGETLMTL TVDQALGADL LTSVADSVGA TSVSAADLRD E
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