| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1231 |
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| Symbol | |
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| ID | 5057681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1389105 |
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| End bp | 1391021 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640473500 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001158079 |
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| Protein GI | 145593782 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00143562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.953695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGCATCT GTTGGGACAC GTCCTGCGCG GGCTCGGGTC GAACTCGCGA CGGTGTCAGA
CTGGTATGCA TGCCTGAGCT GCGGTCGAGG ACCTCCACCC ACGGTCGGAC GATGGCGGGC
GCCCGAGCCC TGTGGCGGGC CACCGGGATG ACCGACGACG ACTTCGGCAA GCCGATCGTC
GCCATCGCCA ACAGCTTCAC CCAGTTCGTT CCGGGGCATG TCCACCTCAA GGAGCTCGGT
GGCCTGGTGG CCGAGGCGGT AGCCGATTCC GGCGGGGTGG GTCGGGAGTT CAACACCATC
GCCGTGGACG ACGGCATCGC GATGGGCCAC GGCGGCATGC TCTACTCGCT GCCAAGCCGG
GAACTGATCG CCGACGCCGT GGAGTACATG GTCAATGCCC ACTGCGCCGA CGCCCTGGTC
TGCATCTCCA ACTGCGACAA GATCACTCCC GGGATGCTGC TGGCCGCGCT GCGGCTGAAC
ATCCCAACTG TCTTCGTCTC CGGCGGCCCG ATGGAGGCCG GCAAGACCGT CGCGATCGAG
GGGGTCGTAC ACTCCAAGAT CGACCTGATC GATGCGATGA TCGCTGCGTC CAACGAGGCG
GTCACCGACG ACCAGCTCGG CCAGATCGAA CGCTCGGCCT GCCCCACCTG CGGCTCCTGC
TCCGGCATGT TCACCGCCAA CTCGATGAAC TGCCTCACCG AGGCGATCGG CCTGGCCCTT
CCCGGCAACG GGTCAACGCT GGCGACCCAC GCCGCCCGCC GGTCACTCTT CGTCGAGGCC
GGCCGCACCG TCGTCGAGAT CGCCAAGCGT TGGTACGACG GGGACGACGC CACGGTGCTG
CCCCGTGCGG TAGCCAACCG CGCCGCCTTC GACAACGCGG TCGCCCTCGA CGTCGCGATG
GGCGGTTCGA CGAACACCAT CCTGCACCTG CTGGCCGCCG CCCGCGAGGC CGAGCTGGAC
TTCGGGGTGG TGGACATCGA CGCCATCTCC CGGCGGGTGC CCTGCCTGGC GAAGGTCGCA
CCGAACTCTC CCCACTACCA CATGGAGGAC GTCCACCGGG CCGGTGGCAT CCCGGCCATC
CTCGGTGAGC TGGACCGCGC CGGCCTACTC AACCGGGAGG TCCACGCGGT GCACTCCCCC
TCGCTGGAGC GCTGGCTCGC CGACTGGGAC GTTCGGGGTG GCACCGCGAC ACCGACGGCG
GTCGAGCTGT TCCATGCCGC ACCGGGCGGG GTCCGCACCG TCGAGCCGTT CTCCACCACC
AACCGCTGGT CGACACTGGA CACAGATGCG GCCGACGGCT GCGTACGGGA GCGGGCCCAC
GCGTACACCG CGGACGGAGG GCTGGCCATC CTGCACGGCA ACCTGGCACC GGAGGGCTGC
GTGGTGAAGA CCGCCGGGGT ACCCGAGGAG TGCCTGACCT TCCGCGGCCC CGCCAAGGTC
TACGAGTCCC AGGACGACGC GGTCACCGCC ATCCTGGCCA AGGAGGTCGT CGCCGGCGAC
GTGGTGGTGA TCCGCTACGA GGGCCCCCGG GGTGGGCCCG GGATGCAGGA GATGCTCTAC
CCCACCTCGT TCCTCAAGGG CCGAGGGCTG GGGCGGGCCT GCGCGCTACT GACCGACGGC
CGCTTCTCCG GCGGCACCTC CGGACTGTCC GTCGGGCACG TCTCCCCGGA GGCCGCCGCC
GGTGGGCTGA TCGCCCTGGT CGAACCGGGC GACGAGATCG TCATCGACAT CCCGAACCGG
GCCATCGAAT TGGCCGTACC GGCCGAGGTG TTGGACGCCC GCCGGGTCGC ACAGGAGAAG
CGAGACCGCC CGTACACGCC GGCGGAGCGG CAGCGCCCCG TCTCCGCAGC GCTGCGCGCG
TACGCCGCCA TGACCACCTC GGCCAGCGAC GGCGCCTACC GCCGCGTCCC CGAGTGA
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| Protein sequence | MCICWDTSCA GSGRTRDGVR LVCMPELRSR TSTHGRTMAG ARALWRATGM TDDDFGKPIV
AIANSFTQFV PGHVHLKELG GLVAEAVADS GGVGREFNTI AVDDGIAMGH GGMLYSLPSR
ELIADAVEYM VNAHCADALV CISNCDKITP GMLLAALRLN IPTVFVSGGP MEAGKTVAIE
GVVHSKIDLI DAMIAASNEA VTDDQLGQIE RSACPTCGSC SGMFTANSMN CLTEAIGLAL
PGNGSTLATH AARRSLFVEA GRTVVEIAKR WYDGDDATVL PRAVANRAAF DNAVALDVAM
GGSTNTILHL LAAAREAELD FGVVDIDAIS RRVPCLAKVA PNSPHYHMED VHRAGGIPAI
LGELDRAGLL NREVHAVHSP SLERWLADWD VRGGTATPTA VELFHAAPGG VRTVEPFSTT
NRWSTLDTDA ADGCVRERAH AYTADGGLAI LHGNLAPEGC VVKTAGVPEE CLTFRGPAKV
YESQDDAVTA ILAKEVVAGD VVVIRYEGPR GGPGMQEMLY PTSFLKGRGL GRACALLTDG
RFSGGTSGLS VGHVSPEAAA GGLIALVEPG DEIVIDIPNR AIELAVPAEV LDARRVAQEK
RDRPYTPAER QRPVSAALRA YAAMTTSASD GAYRRVPE
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