Gene Strop_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1227 
Symbol 
ID5057677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1385925 
End bp1386431 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content68% 
IMG OID640473496 
Producthypothetical protein 
Protein accessionYP_001158075 
Protein GI145593778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0203008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.739603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTA CCGCCCGCTC GGTAGCCGAG GAACCCCACC CGGTCGGCCA CCCGGGCCGT 
TGGCTCGCCA ATGCCCGCGG TGCCGACGTC CTCGATCTCG CCAGTACGTG CGCCCACACC
CTCACCGCCA CCATCGACGA CGCCGGCCTG CGGCCACTAC CACCCCCATC GCCCTCAACG
GCCGCAAACA CACCACCATC AAACCCCGCC GCCGCCGTCG AACAGTTCCG CATCATCAAC
GTCGACGCCG GTGACGACCT CACCCTCAAC CACCTCACCA TCACCAGCGG ACACACCGAC
GGCGACGGCA TTTACCGCGC CGGCGTCACC ACCGTGCGAC ACACCACCGT GAGTCGTCAT
TCCGCCACCG CCAGGGACGG CGGGTATCGA TACCTCCGGG GGGAGGCAGG TGACCCTGGA
GAAAACAGCG GTGAAGGCGA ACACCGCAGG CAGCACCGGC GGTGTGGCAA GCAGCGGCAA
CTCCGCCGTC GTGGTAGTAA GGCATAG
 
Protein sequence
MAATARSVAE EPHPVGHPGR WLANARGADV LDLASTCAHT LTATIDDAGL RPLPPPSPST 
AANTPPSNPA AAVEQFRIIN VDAGDDLTLN HLTITSGHTD GDGIYRAGVT TVRHTTVSRH
SATARDGGYR YLRGEAGDPG ENSGEGEHRR QHRRCGKQRQ LRRRGSKA