Gene Strop_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1206 
Symbol 
ID5057656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1358020 
End bp1358793 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID640473475 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001158054 
Protein GI145593757 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGAGT TCGTGCGGCT GGAGACCAAG GACGGAATCG GCACCATCCG GTTGGAGCGA 
CCGCCGATGA ATGCGCTGAA TACCCAGGTG CAGGAGGAGC TGCGCGCCGC GGCGACCCAG
GCGGCTGGCG ATCCGGCCGT CCGCGCGGTC ATCGTGTACG GCGGGGACCG CGTCTTCGCC
GCGGGCGCGG ACATCAAGGA GATGGCCGAC ATGTCCTACG TGGATATGGC CGAGCGGGCC
GCCGAGCTCT CCAGCGCGCT GGGGGCGATC GCCCAGATCC CCAAGCCGGT GGTCGCCGCG
ATCACCGGGT ACGCCCTCGG CGGCGGCTGC GAGTTGGCCC TCGCCTGTGA CTGGCGGGTG
GTTGCCGAGG ACACCAAGCT CGGCCAGCCA GAGATCAAGC TCGGTGTCAT TCCCGGTGCG
GGTGGCACCC AGCGGTTGGC CCGACTGGTT GGTCCGGCCC GCGCCAAGGA CCTGATCATG
TCGGGTCGGA TGGTGGACGC GCCGGAGGCG CTCCGGATCG GGCTGGCCGA CCGGGTGGTT
CCCTCCGCCG AGGTCTACGC CACCGCGGTG GCCCTGGTGC AGCCGTACCT GACCGGGCCG
GTGCAGGCCC TGCGCGCGGC GAAGCTGGCG GTCGACGGTG GCCTGGAGAT GGATCTGACC
TCCGGCCTGG CCTGGGAGAG CCAGCTCTTC GCGGCGCTGT TCGCCACCGA CGACCGGCGG
GAGGGCATGG CGGCCTTCGT GGAGAAACGC AAGCCGGACT TCACCGGACG TTGA
 
Protein sequence
MGEFVRLETK DGIGTIRLER PPMNALNTQV QEELRAAATQ AAGDPAVRAV IVYGGDRVFA 
AGADIKEMAD MSYVDMAERA AELSSALGAI AQIPKPVVAA ITGYALGGGC ELALACDWRV
VAEDTKLGQP EIKLGVIPGA GGTQRLARLV GPARAKDLIM SGRMVDAPEA LRIGLADRVV
PSAEVYATAV ALVQPYLTGP VQALRAAKLA VDGGLEMDLT SGLAWESQLF AALFATDDRR
EGMAAFVEKR KPDFTGR