Gene Strop_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1203 
Symbol 
ID5057653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1355647 
End bp1356807 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content70% 
IMG OID640473472 
Productglycosyl transferase, group 1 
Protein accessionYP_001158051 
Protein GI145593754 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.359152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAGCA TAGGGTGGAA CGTTGCTTTC GTGCACAGCT ACTACAGCGA CGGGAAGCCC 
AGCGGCGAGA ACGTCATGGT GGACGCCGCA GCCGAAGCGC TGCGGCGCGC GGGACATGCG
GTGGACCTGG TCGGACGGCG AACGGATGAG CTCAGCGGAC GTACGGGCTA CGCCGCTGTG
GCCGCGCTCA GTACCGTTAC CGGCGTTGGT CCGTCGCCCG TCGGTGAGTT TTGGCCCACG
GACGTTGACG TGGTTCACGT GCACAACCTG TTCCCGAACT TCGGCCGTGG CTGGCTCCGT
ACGCTGTCCA AGCCCCTCGT CGTCACCCTG CACAACTACC GTCCGTTGTG CGCGGCAGCG
ACCCTGTTTC GCGGCGGTGC CACCTGCACG GCCTGCCTGC GGGGTTCGCT GCCCGGGCTG
CGCCACGGCT GCTACCGCGG CAGCCGGATG GCCACTCTGC CGCTGACGTT GGGTCAGCGG
ACGCTGCGCC GCGACCTGTT GGGTCGGGCG GACCGGTTGA TCGTACTGTC CGAGGTGCAG
CGGGACTTCT ACGTGCGGGC CGGCGTGGAC GAGCGCAAGC TCGTTGTCGT CCCGAACTTC
GTGCCGGATG ACATGGACCG AGGCCCGGGG CCCGGCGGAG TGGACTGGGT CTACTCCGGC
CGCCTGGACG ACGCCAAGGG CATCATCGAA CTCATCACCC ACTGGCCGCG CGAGCTGCGA
CTGACCGTCT TCGGCACCGG CCCGCTGCTG GCGAACGCCA GGGAACTCGC CCGAGGCAAG
GACATCACCT TCTCCGGGCA CCTGCCGCGC GCGGCCGTGA CCGGCGCCGT GCGGAACGCC
CGGGGAGTGG TGTTTCCGAG CCGGTGGCCG GACCCGTTCG GCCTGGCCTA TGCAGAGGCC
ATGGTCGCCG GGACACCGGT GCTGGCGCGC CGTCCCGCGG CGGCCGCCCA GTTCGTGCGC
CAGCAGGGCA CCGGCGTTGC CGTCGACGAG GTCACCAGCG ACGCGATACG CGCCGCGCAC
GAGCTGTTTC CCTCGCTGCG TACCGCCTGC CGCGCCGCGT ACGTCGCGCA CTACCGGGAG
CCCGACCATG TTGCGGCGCT CACCGAGGTG TACCTGCAGG CCTGCGCTGC TCGCCGCGCC
AGGCGGTCAG CGATGGCATG A
 
Protein sequence
MDSIGWNVAF VHSYYSDGKP SGENVMVDAA AEALRRAGHA VDLVGRRTDE LSGRTGYAAV 
AALSTVTGVG PSPVGEFWPT DVDVVHVHNL FPNFGRGWLR TLSKPLVVTL HNYRPLCAAA
TLFRGGATCT ACLRGSLPGL RHGCYRGSRM ATLPLTLGQR TLRRDLLGRA DRLIVLSEVQ
RDFYVRAGVD ERKLVVVPNF VPDDMDRGPG PGGVDWVYSG RLDDAKGIIE LITHWPRELR
LTVFGTGPLL ANARELARGK DITFSGHLPR AAVTGAVRNA RGVVFPSRWP DPFGLAYAEA
MVAGTPVLAR RPAAAAQFVR QQGTGVAVDE VTSDAIRAAH ELFPSLRTAC RAAYVAHYRE
PDHVAALTEV YLQACAARRA RRSAMA