Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1203 |
Symbol | |
ID | 5057653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1355647 |
End bp | 1356807 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640473472 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001158051 |
Protein GI | 145593754 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.359152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATAGCA TAGGGTGGAA CGTTGCTTTC GTGCACAGCT ACTACAGCGA CGGGAAGCCC AGCGGCGAGA ACGTCATGGT GGACGCCGCA GCCGAAGCGC TGCGGCGCGC GGGACATGCG GTGGACCTGG TCGGACGGCG AACGGATGAG CTCAGCGGAC GTACGGGCTA CGCCGCTGTG GCCGCGCTCA GTACCGTTAC CGGCGTTGGT CCGTCGCCCG TCGGTGAGTT TTGGCCCACG GACGTTGACG TGGTTCACGT GCACAACCTG TTCCCGAACT TCGGCCGTGG CTGGCTCCGT ACGCTGTCCA AGCCCCTCGT CGTCACCCTG CACAACTACC GTCCGTTGTG CGCGGCAGCG ACCCTGTTTC GCGGCGGTGC CACCTGCACG GCCTGCCTGC GGGGTTCGCT GCCCGGGCTG CGCCACGGCT GCTACCGCGG CAGCCGGATG GCCACTCTGC CGCTGACGTT GGGTCAGCGG ACGCTGCGCC GCGACCTGTT GGGTCGGGCG GACCGGTTGA TCGTACTGTC CGAGGTGCAG CGGGACTTCT ACGTGCGGGC CGGCGTGGAC GAGCGCAAGC TCGTTGTCGT CCCGAACTTC GTGCCGGATG ACATGGACCG AGGCCCGGGG CCCGGCGGAG TGGACTGGGT CTACTCCGGC CGCCTGGACG ACGCCAAGGG CATCATCGAA CTCATCACCC ACTGGCCGCG CGAGCTGCGA CTGACCGTCT TCGGCACCGG CCCGCTGCTG GCGAACGCCA GGGAACTCGC CCGAGGCAAG GACATCACCT TCTCCGGGCA CCTGCCGCGC GCGGCCGTGA CCGGCGCCGT GCGGAACGCC CGGGGAGTGG TGTTTCCGAG CCGGTGGCCG GACCCGTTCG GCCTGGCCTA TGCAGAGGCC ATGGTCGCCG GGACACCGGT GCTGGCGCGC CGTCCCGCGG CGGCCGCCCA GTTCGTGCGC CAGCAGGGCA CCGGCGTTGC CGTCGACGAG GTCACCAGCG ACGCGATACG CGCCGCGCAC GAGCTGTTTC CCTCGCTGCG TACCGCCTGC CGCGCCGCGT ACGTCGCGCA CTACCGGGAG CCCGACCATG TTGCGGCGCT CACCGAGGTG TACCTGCAGG CCTGCGCTGC TCGCCGCGCC AGGCGGTCAG CGATGGCATG A
|
Protein sequence | MDSIGWNVAF VHSYYSDGKP SGENVMVDAA AEALRRAGHA VDLVGRRTDE LSGRTGYAAV AALSTVTGVG PSPVGEFWPT DVDVVHVHNL FPNFGRGWLR TLSKPLVVTL HNYRPLCAAA TLFRGGATCT ACLRGSLPGL RHGCYRGSRM ATLPLTLGQR TLRRDLLGRA DRLIVLSEVQ RDFYVRAGVD ERKLVVVPNF VPDDMDRGPG PGGVDWVYSG RLDDAKGIIE LITHWPRELR LTVFGTGPLL ANARELARGK DITFSGHLPR AAVTGAVRNA RGVVFPSRWP DPFGLAYAEA MVAGTPVLAR RPAAAAQFVR QQGTGVAVDE VTSDAIRAAH ELFPSLRTAC RAAYVAHYRE PDHVAALTEV YLQACAARRA RRSAMA
|
| |