Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1177 |
Symbol | |
ID | 5057627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1320778 |
End bp | 1321611 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640473446 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_001158025 |
Protein GI | 145593728 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.526687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.706287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTTC TCGTGGTGGG TGGTAGTGGT CTGCTGGGCC GAGAGATCGT GCGCCAGGCG CGGCGGAGCG GTCGTCAGGT GGCGGCGACC TTCCACCGTC AGGTGGTGCC GGTTGCCGGC GTGAACTGGC GAAAACTCGA CATCCGACGC CGCGACGAGG TCGCTGCAGT GGTCAACCAG CTCCGACCCG CTGCGATCAT CAACGCGGCG TACCGGCAGG ACGACTGGGC TATCACCGCC GACGGCGGCA TGCACGTGGC CGCCGCCGCG GTCGCCAACC GGGCCCGCCT GGTGCAGGTC TCCAGTGATG CGGTCTTCTC CGGCACAGCG GAACGCTACG ACGAGACGTG TAGCCCCGAC CCGACCAGCC CATACGGTGC GGCCAAGGCC GCGGTCGAGA CGGCGACTAC GGGCCTGGAT CCGGGTGCGG TCATCGCCCG AACCTCTTTG ATCATCGGAG CTGATGGCAG CTCCTCCCAG GAGAGGCTGG TGCACGCCCT CGCCGCCAAC CCCACCAGCG GCTTCCTCTT CACCGACGAC CTGCGTTGCC CGATCCACGT CACGGACCTG GCCGCGGCGC TCCTGGAACT GGCCGCTTCC GCGTACGCCG GAATCCACCA CGTGGCTGGC GCCGACGCCG TCAGTCGCTA CGAACTCGGC CTGCTCATCG CCCGTCGCGA CGGTATCGAC GACTCGGTCC TGCCCGCCGG CCGGCGGGCT GACACCACCG TTCCTGGTCC GGTCAGGGTT CGCCTCGACT GTGCCGAGAC CCAGTCAAGA CTGACCACCC GGCTCCGTGG TGCCCGGACG TTCCTTGCCC CTACCTGCGC CTAA
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Protein sequence | MDLLVVGGSG LLGREIVRQA RRSGRQVAAT FHRQVVPVAG VNWRKLDIRR RDEVAAVVNQ LRPAAIINAA YRQDDWAITA DGGMHVAAAA VANRARLVQV SSDAVFSGTA ERYDETCSPD PTSPYGAAKA AVETATTGLD PGAVIARTSL IIGADGSSSQ ERLVHALAAN PTSGFLFTDD LRCPIHVTDL AAALLELAAS AYAGIHHVAG ADAVSRYELG LLIARRDGID DSVLPAGRRA DTTVPGPVRV RLDCAETQSR LTTRLRGART FLAPTCA
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