Gene Strop_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1119 
Symbol 
ID5057567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1263114 
End bp1263887 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content72% 
IMG OID640473387 
Productcobalt ABC transporter, ATPase subunit 
Protein accessionYP_001157968 
Protein GI145593671 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.449821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGGA ACGTGCAGCC GACAACGTCC CCCAGCCTCG ACGTGCGCGA CGTGCGCTAC 
GCCTACCCGG ACGGGCACGC GGCGCTGCGG GGCGTGGAGC TGACCGTGCC CCGCGGTGAC
CGGGTGGCAC TGCTCGGGCC GAACGGCGCC GGTAAGACGA CCCTGGTGCT GCACCTCAAC
GGCATCCTCA CCCCCACCGC GGGGAGCGTG ACCGTCGGTG GACTGACCGT CCGCCCGGAT
CGGTCGACCC TGGCCGAGGT GCGCCGGCGG GTGGGCATCG TCTTCCAGGA CCCGGATGAC
CAGCTCTTCC TGCCCACCGT CGCCGAGGAC GTGGCGTTCG GCCCGGCCAA CCTGGGGCTG
CGCGGTGCCG AGCTGACGAA CCGGGTGGAC GAGGCGCTCG CCGCGGTCGG CATGAGCGAG
CACCGGGACC GCGCGCCGCA CCACCTGTCG TTCGGGCAGC GTCGCCGGGT CGCGGTGGCG
ACGGTGCTCG CCATGCACCC GGAGATCCTG GTGCTGGACG AGCCATCGTC CAACCTCGAC
CCAGCTGCCC GCCGCGAACT GGCTGAGATC CTGCGCGCCC TGCCGGTGAC CCTGTTGATG
GTCACCCATG ATCTGCCGTA CGCGCTGGAG CTGTGCGAAC GCTCGGTCAT TCTGGACGCC
GGCCGGCTCG TCGCCGACGG CCCCACGGAG GAGATCCTGG CCGACGAGGC GCTGCTCGCC
CGGCACCGCC TCGAACTGCC CTACGGATTC ACGCCCCGCC CGACACTGCG TTGA
 
Protein sequence
MIGNVQPTTS PSLDVRDVRY AYPDGHAALR GVELTVPRGD RVALLGPNGA GKTTLVLHLN 
GILTPTAGSV TVGGLTVRPD RSTLAEVRRR VGIVFQDPDD QLFLPTVAED VAFGPANLGL
RGAELTNRVD EALAAVGMSE HRDRAPHHLS FGQRRRVAVA TVLAMHPEIL VLDEPSSNLD
PAARRELAEI LRALPVTLLM VTHDLPYALE LCERSVILDA GRLVADGPTE EILADEALLA
RHRLELPYGF TPRPTLR