Gene Strop_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1118 
Symbol 
ID5057566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1262347 
End bp1263117 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content73% 
IMG OID640473386 
Productcobalt ABC transporter, inner membrane subunit CbiQ 
Protein accessionYP_001157967 
Protein GI145593670 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID[TIGR02454] cobalt ABC transporter, permease protein CbiQ 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.933016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGCCG GGCACAGCCA GCTGCTCTAC CACCGCTCGG ACTCGCCGGT GCACCGACTG 
CCCCCCGAGG TGAAGATCAC GGCGATGGTG GCCTTCACCC TCGCCGTGGT CGCCACCCCC
CGGGAGGCGC TCTGGGCCTT CGGTGGCTAC GCCGTGCTGG TGGCGGTGGT CGCGGCGGTG
GCCCGGGTCC GGCCCGGCTG GCTGCTGCGC CGGTCGCTGA TCGAGCTGCC GTTCGTGCTG
TTCGCGTTCG CCCTGCCGTT CCTCGGCGTG GGCGAGCGTG TCGAACTCCT CGGCCTGTCG
GTCTCCGTGG ACGGGCTGTA CGGGGCGTGG AACATCCTCG CCAAGGGCAC GCTGGGTGTC
CTGGCGTCGC TGCTGCTGGC CGCGACCACC ACCACCCGGG ACCTGATCGT CGGATTGGAC
CGGCTGCGCT GCCCGCAGCT GCTCACCCAG ATCGCCGCCT TCATGCTGCG CTACCTGGAC
GTGCTGGTCG GTGAGGCCCG ACGAATGCGG GTGGCCCGCC TGTCCCGGGG CGACGATCCG
CGCTTCGTGT GGCAGCTACG GGGATTCGCG ACCGGGGTCG GGGCCCTGTT CCTGCGCGCC
TACGAGCGGG GGGAGCGGGT GTACCTGGCG ATGCTGTCGC GCGGCTACAC CGGGCGGATG
CCCCAGATGG GGCAGGGCAC GGACGCGGCG ACCGCCGGGC AGTGGCTGCT CGCCTCGACC
GTCCCCGCCG TGGCGGCCGG CGTCGCCGCC ACCGCCCTGG TCCTGACATG A
 
Protein sequence
MGAGHSQLLY HRSDSPVHRL PPEVKITAMV AFTLAVVATP REALWAFGGY AVLVAVVAAV 
ARVRPGWLLR RSLIELPFVL FAFALPFLGV GERVELLGLS VSVDGLYGAW NILAKGTLGV
LASLLLAATT TTRDLIVGLD RLRCPQLLTQ IAAFMLRYLD VLVGEARRMR VARLSRGDDP
RFVWQLRGFA TGVGALFLRA YERGERVYLA MLSRGYTGRM PQMGQGTDAA TAGQWLLAST
VPAVAAGVAA TALVLT