Gene Strop_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1083 
Symbol 
ID5057530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1229531 
End bp1229992 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content69% 
IMG OID640473350 
Producthypothetical protein 
Protein accessionYP_001157932 
Protein GI145593635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.769148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTGA CCTCGCTGGC CGAAGCCGAC CGATCTTGCC TGCCCGAAAC CGACAGCACC 
GCACTGGCCG AGCTCGACCT GGTGCTGCTG AAGGACATCG ACCGGGTGCT CCGAGCCGCC
TGGTCGGCCG AGACCTGCGA TCCGGTTGAT CTGCCCTGGG CTGCGACGAA TCCAACCCGT
GGGCAGTGCG GCGTGACGGC GCTCGTGCTG CGTGAGCTGA TCGGCGGCGA GCTGCTGTGC
GCGGTGGTGC TGGGGCGGGA TGGGTCCCGG CAGGGTGTGC ACTTTTGGAA CCGCCTCCCC
GGCGGGGTGG AGATCGACCT CACCCGGGCG CAGTGCACAG TGGACGAGAC TGTCCAGGAG
CCGTCCGTGG TCACCATGCC GCCGGGGCCA CCCAGCCGTT GCACCCAGCA GTACGCGCTG
CTCCGTCACC GGGTGCGCGG CATGCTCGGC CTCACCGACT GA
 
Protein sequence
MLLTSLAEAD RSCLPETDST ALAELDLVLL KDIDRVLRAA WSAETCDPVD LPWAATNPTR 
GQCGVTALVL RELIGGELLC AVVLGRDGSR QGVHFWNRLP GGVEIDLTRA QCTVDETVQE
PSVVTMPPGP PSRCTQQYAL LRHRVRGMLG LTD