| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0999 |
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| Symbol | |
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| ID | 5057445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1118388 |
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| End bp | 1119368 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640473269 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001157852 |
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| Protein GI | 145593555 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.614939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTGCCA GCGGGCGCAG CTATTGGCTG ACCGAACCGT GCCGAATCCG ACGCGAAGAC
AACAGCATCC GGATCGAACG CGCCGATGGA CAACCTGTTC GCATTCCGAT CACCGACATT
CGCGACCTTG TGCTCTTCGA CAACGCCGAC ATCAACACCG CCGCGGTATC GCTACTCAGC
CGGCACGGAG TCACCGTGCA CCTACTTGAC CACTACGGCA ACTATGCTGG CGCGCTGACT
CCAGCCGACG ACATGTCCTC CGCACACGTC GTCCGCGCCC AGGTGGCCCT GACAGGCAAC
CCTCAGGCCC GACTCGCTGT CGCGCAGGCC CTCGTCCGGG CGACCGCGGT CAACGTAGCC
TGGGCCCTGG GCACGGACCT GCTCGATGGG CCACTCGAAC GACTTCCCGC CCAAATCGGT
GCCAGCACCT CATCCGGAGA CCTGATGGGA GTCGAAGGTA ACTTCCGGCG AACCGCGTGG
GGAGTGCTCG ATACCCTGCT ACCGCCCTGG CTCCGGCTTG ACGGACGCAC CCGTCGCCCA
CCCAGTAATG CCGGCAACGC GTTCATCAGC TACCTCAATG CCATCACCTA CGCTCGGGTT
CTCACCGCGA TTCGCTGTAC GCCGCTGCAC CCGGCGATCG GCTTCCTGCA CGCCGACACC
GACCGGCGCC GAAACACCCT CGCCCTTGAC CTCGCCGAAC CGTTCAAGCC GCTGCTCGCC
GAACGACTGC TCCGCCGAGC AGCCGCGCAG CGAACCCTGA CCGCTGCAGA CTTCGTCAGC
GACGTCCGTA GCGCGTCCCT CAGCCAGGCC GGACGGAAAA AGATTGCTGT CATGGTCCGC
GAAGAACTGG CCACCACCGT CCAGCATCGG CAACTCCGGC GAAAGGTGTC CTACGAGGAG
TTGATCCACC TGGAGGCCCT CAAGCTCGTA CGACTATGCC TCGAAGGCAC GACCTACAAG
CCCTTCCGGC CCTGGTGGTA G
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| Protein sequence | MSASGRSYWL TEPCRIRRED NSIRIERADG QPVRIPITDI RDLVLFDNAD INTAAVSLLS
RHGVTVHLLD HYGNYAGALT PADDMSSAHV VRAQVALTGN PQARLAVAQA LVRATAVNVA
WALGTDLLDG PLERLPAQIG ASTSSGDLMG VEGNFRRTAW GVLDTLLPPW LRLDGRTRRP
PSNAGNAFIS YLNAITYARV LTAIRCTPLH PAIGFLHADT DRRRNTLALD LAEPFKPLLA
ERLLRRAAAQ RTLTAADFVS DVRSASLSQA GRKKIAVMVR EELATTVQHR QLRRKVSYEE
LIHLEALKLV RLCLEGTTYK PFRPWW
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