Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0990 |
Symbol | |
ID | 5057436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1108114 |
End bp | 1108950 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640473260 |
Product | hypothetical protein |
Protein accession | YP_001157843 |
Protein GI | 145593546 |
COG category | [R] General function prediction only |
COG ID | [COG4188] Predicted dienelactone hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCGC CGGACATCCG CGTGCTGACA GACCCCCGAC GAGAGGCATG GGGTACGGAC GGTCCACGGC CGATCGTGAC CTACGTGTGG CCGCCAGACA CCGCGACGAC CAGTGGCACC GTGCTGCTCT CGCATGGAAC CGGCGGTTGC GCACTCGATC TGTCCTGGCT GGCTGAGCCG CTGGCCACGG CTGGCCTGCG GGTGATCGGC GTCGACCATC ACGGCAACAA CTACCGTAGT GGCTACCACG CCGAGGGTTT CGCGCGTTGG TGGGACCGCC CCCAGGACCT TTCGGTGGTG CTGGACCATC TTGCCGACGG CGGTCCCATT GGAGTCGCCG GCTTCTCGCT CGGCGGCTAC ACCGCCGCCG CAGTGCTTGG CGCACGCATC AACGCCGACC TGTTCGGCGC TATCGCCACC GGACGGGCGA CGGTGCCACT ACCGCCGGAA TACCCGACGC TGATCGACGA ACTGACCGAC CGGATCGGCA TCGATGACAT CGCCGCGTGG ATCACCGAAT CCGGCGGCGA CTACGCCGAT CGGCGTGTGA CCGCTGGTCT TCTCATCTGC CCTGCGCAGG GCCAACTACT TACCTCCGCC AGCCTGCGAG GCATCACGAC GCCCGTGTCG ATCTGGTGGA CCGGCGAGGA CGACCAGACC CCGGCCGAGA CCAACGCGCT GCACTACGCT TCCTTGATTC CTGGCGCGAC GGCGCACTGC GCCGACCTCT CGGCCGGCCA CTACGTGTTC GTGCGGGACA TGCCCGATGC AGATCGGATC CGCACCCGCC TCGCCGCCGC GGCCGTCACC TTCTTCCGCA AGCAGTTGAC CGCGTAG
|
Protein sequence | MTSPDIRVLT DPRREAWGTD GPRPIVTYVW PPDTATTSGT VLLSHGTGGC ALDLSWLAEP LATAGLRVIG VDHHGNNYRS GYHAEGFARW WDRPQDLSVV LDHLADGGPI GVAGFSLGGY TAAAVLGARI NADLFGAIAT GRATVPLPPE YPTLIDELTD RIGIDDIAAW ITESGGDYAD RRVTAGLLIC PAQGQLLTSA SLRGITTPVS IWWTGEDDQT PAETNALHYA SLIPGATAHC ADLSAGHYVF VRDMPDADRI RTRLAAAAVT FFRKQLTA
|
| |