| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0978 |
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| Symbol | |
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| ID | 5057422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1097512 |
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| End bp | 1099140 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640473247 |
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| Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_001157832 |
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| Protein GI | 145593535 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.396659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCG TCTTCTCTGT GCCCGAGCCC CGCAACGAGC CGGTACGCCC CTACGAGCCG
GGGGGCACCG ACCGGGACCG GCTGCAACGG CGGCTGGTCG AGCTGGCCAA CGACCGGATC
GACCTGTCGA TGACCATCGC GGGCGAGCAA CGGATGGCCG GCGGTGTCTC GATCGACGTG
GTGCAGCCCC ACCGACACGC GCACGTGTTG GGCGTCACCG CCCACGCCAC CCACGATGAC
GCTCGGGCAG CGGTGCAGGC CGCCAAGGAC GCGGCGCCCG GTTGGCGGGC GTTGCCGTTC
GCGGAGCGGG CAGCGATCTT CCTGCGCGCC GCTGACCTGC TCGCTGGGCC CTGGCGAGAC
ACGCTGAACG CCGCCACGAT GCTCGGCCAG TCGAAGACCG CATTCCAGGC GGAGATCGAT
TCGGCCTGTG AGTTCATCGA CTTCCTTCGG TTCAACGTCC ACTTCGCTCG CCGGCTCCTC
GCCGAGCAGC CACTCTCCTC GCCGGGCACC TGGAATCGGT TCGACCACCG TCCGCTCGAG
GGCTTCGTCT ACGCGATCAC CCCGTTCAAC TTCACCGCGA TCGCCGGCAA CCTACCCTCG
GCGCCGGCCC TGCTCGGCAA CACGGTGGTC TGGAAGCCGG CCCCCACCCA GCAGTTCGCC
GCGCACTTCA CGATGCGGCT CTTCGAGGCG GCGGGCCTGC CCCCCGGTGT GATCAACATG
GTCACCGGCC GAGGCGAGGA GGTGTCCGAC GTGGTGCTGG CCGACCCCGA CCTGGCCGGC
ATCCACTTCA CCGGCTCCAC CAAGGTCTTT CAGCAGCTCT GGCGGACCGT CGGCGAGAAG
ATCGCCCACT ACCGGAGCTA CCCGCGGCTG GTCGGCGAGA CCGGCGGCAA GGACTTCGTG
GTCGCCCACC CCAGTGCTGA CGTGGACGCG CTGCACACCG CATTGATCCG GGGCGCGTAC
GAGTTCCAGG GCCAGAAGTG CTCCGCGGCC TCCCGCGCGT ACATTCCGCG GTCACTGTGG
GCGGGTGGGC TGCGTGACCG GCTCGCCGCC ACCGCGGAAG CGCTCACCTA CGGTGACGTC
ACCGACTTCA GTAACTTCGG CGGCGCCGTC ATCGACGCCA AGGCGTACGC GCGGCACACC
GCTGCCCTGG AGTTGATCTC CAGGGATGAC TGTTGCCGGG TTGTCGCCGG CGGCACCGCC
GACGACACGG TTGGCTACTT CGTCCGGCCC ACGCTCTTCG AGTGCACCGA CGCCGCGCAC
GAGACCTTCA CCACCGAGTA CTTCGGGCCG ATCCTCGGCG TGCACGTCTT CGACGACGCG
CGTTTCGACG AGGCGGTCGC CCAGGCCGAA TCGATCGCGC CGTACGCGTT GACAGGCGCC
ATTTTCGCAA CCGACCGGCA GGTGGTCGAC CGGGTCGCTG AGCGGATGCG GTACGCGGCC
GGAAACTTCT ACATCAACGA CAAGCCAACC GGTGCGGTGG TTGGTCAGCA GCCATTCGGC
GGTGCCCGCG CCAGTGGTAC CAACGACAAG GCCGGCTCCT GGCAGAACCT GGTCCGGTGG
ATGTCCCCCC GCACGATCAA GGAGACCTTC GTCCCGCCGA CCGACCACAC CTATCCCCAC
ATGCGCTAA
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| Protein sequence | MDAVFSVPEP RNEPVRPYEP GGTDRDRLQR RLVELANDRI DLSMTIAGEQ RMAGGVSIDV
VQPHRHAHVL GVTAHATHDD ARAAVQAAKD AAPGWRALPF AERAAIFLRA ADLLAGPWRD
TLNAATMLGQ SKTAFQAEID SACEFIDFLR FNVHFARRLL AEQPLSSPGT WNRFDHRPLE
GFVYAITPFN FTAIAGNLPS APALLGNTVV WKPAPTQQFA AHFTMRLFEA AGLPPGVINM
VTGRGEEVSD VVLADPDLAG IHFTGSTKVF QQLWRTVGEK IAHYRSYPRL VGETGGKDFV
VAHPSADVDA LHTALIRGAY EFQGQKCSAA SRAYIPRSLW AGGLRDRLAA TAEALTYGDV
TDFSNFGGAV IDAKAYARHT AALELISRDD CCRVVAGGTA DDTVGYFVRP TLFECTDAAH
ETFTTEYFGP ILGVHVFDDA RFDEAVAQAE SIAPYALTGA IFATDRQVVD RVAERMRYAA
GNFYINDKPT GAVVGQQPFG GARASGTNDK AGSWQNLVRW MSPRTIKETF VPPTDHTYPH
MR
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