Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0968 |
Symbol | |
ID | 5057412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1084847 |
End bp | 1086520 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640473237 |
Product | ATPase domain-containing protein |
Protein accession | YP_001157822 |
Protein GI | 145593525 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.193416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTGT GGGGTGCTCG GCTGGTCCCC GTGCTGCACC AGGCCTGGCG GCGCTCGTTG CAGGTACGGG TGGTGACCAT CACACTCCTG GCTTCCAGCC TGCTGGTCGG TGGCTTCGCG TACCTCATCG CAGACAAGAT CACTAATATC CTGCTGGAGA ATGCCGAGGC CGATGTGCAG GACCGGCTGA ACAGCGGTGC GGCGTACGCG GCCAAACAGC TTGGGTTCTA CCACAAGCCG GAGGAGGCGC AGTTCCAGGA GACCGTTGAC GGAACGGTGA ACTACCTGGC CGGCGGCGAC CCCCAGCAGG CGACCGGGGT GGTGGTCGCC CTGATCGCCG ACAACGCCGA TGGGGTGGTC CAGCCGCGGA CCGCCCCGGC GGTGGACGAT TTCGGTTCGT TGATCAGCCC GGAGCTGCGT GCCACCGTCG CCGGGGGTGA GGTCGCCAGC CAGATCAGCA CCGGCCGACT CGGCGAGACC GATACGAAGT ACCTGGCCTA CGGCTCACCG GTGCCGACCC AGTTCGGTCA GGTCGAGCTC TACTACCTCG TTTCGTTGAC CCGGCAGGAC GCCACCGCCG CTGACGCCCG GGCAACCGTG GTCGGGACCG GGATCGCCCT GGTGGTGCTG CTTGGGTTGC TCGCCGCCCT GGTGACCCGG CTGGTAGTGA CGCCGGTCCG GGTGGCCGCC CGGACGGCGC AGCGGCTCTC CGCCGGCCTG CTCGACCAGC GGATGGCGGT CAACGGCGAG GACGACCTGG CGCTGCTCGC CGAGGCCTTC AACCAGATGG CGACCAACCT ACAACGGCAG ATCCTTCGGT TGGAGGAGAT GTCGCGGCTG CAACGCCGCT TCACCTCGGA CGTCTCGCAC GAGCTGCGGA CTCCGTTGAC AACAGTCCGG ATGGCCGCAG ACTTGATCTT CGCCGAGCGG GATGGGTTCG ACCCGGCCGT GGCCCGCAGC GCCGAGCTGC TCCAGACGGA GCTGGACCGG TTCGAGGAGC TGCTGACCGA CCTGCTGGAG GTCAGTCGAT TCGACGCCGG CTTCGCGGCG CTGGATGCCG AACCCACCGA CCTGGTGCCG GTCGTGCACC GGGTTGTGGG CCGGCTGGCC TGCCTCGCCG AGCGGGTCGG GGTCACCGTC GAGCTGGATC TGCCGAGTGG CCCGGTCATT GCCGAGGTCG ACCCACGCCG GGTCGAGCGG GTGCTGCGAA ATCTGGTGGG CAACGCCGTC GAACACGGCG AGGGCAGGCC GGTGCGCATC ACCGTGGGGG TGGACGAGAC CGCGGTGGCG GTCACCGTGC GTGATCATGG GTTGGGGCTC AAGCCGGGGG AGGAGAAGTT GATTTTCAAC CGGTTCTGGC GGGCCGACCC GTCGCGGGCC CGACAGACCG GGGGCACCGG GTTGGGTCTG TCGATCAGCC TTGAGGACGC CCGGCTACAC CGCGGGTGGC TGGAGGCATG GGGCGCACCA GGACAGGGGG CCCAGTTCCG GCTCACCCTG CCGGCGCGGG CCGGCGACCG GCTGACCTCC TCGCCGTTGC GACTGGTGCC CGCCGACGCG AGGCTGCCTT GCGGTGGCCC GCGCGAGGGC GGTCTGCTCG CCATCGGTCA GGGCAGCGCG GGAGTGCTGG CGGTCGGTCC CGCACCGGAC GGCCGTGCGG AGGCTCGGCC GTGA
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Protein sequence | MSVWGARLVP VLHQAWRRSL QVRVVTITLL ASSLLVGGFA YLIADKITNI LLENAEADVQ DRLNSGAAYA AKQLGFYHKP EEAQFQETVD GTVNYLAGGD PQQATGVVVA LIADNADGVV QPRTAPAVDD FGSLISPELR ATVAGGEVAS QISTGRLGET DTKYLAYGSP VPTQFGQVEL YYLVSLTRQD ATAADARATV VGTGIALVVL LGLLAALVTR LVVTPVRVAA RTAQRLSAGL LDQRMAVNGE DDLALLAEAF NQMATNLQRQ ILRLEEMSRL QRRFTSDVSH ELRTPLTTVR MAADLIFAER DGFDPAVARS AELLQTELDR FEELLTDLLE VSRFDAGFAA LDAEPTDLVP VVHRVVGRLA CLAERVGVTV ELDLPSGPVI AEVDPRRVER VLRNLVGNAV EHGEGRPVRI TVGVDETAVA VTVRDHGLGL KPGEEKLIFN RFWRADPSRA RQTGGTGLGL SISLEDARLH RGWLEAWGAP GQGAQFRLTL PARAGDRLTS SPLRLVPADA RLPCGGPREG GLLAIGQGSA GVLAVGPAPD GRAEARP
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