Gene Strop_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0954 
Symbol 
ID5057398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1069561 
End bp1070220 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID640473224 
Productmethyltransferase type 11 
Protein accessionYP_001157809 
Protein GI145593512 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.579245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCA GAACCCAAGA ACTGCGAGAC GCGCACGACG TGCTCTCGGA GTGGTACGCC 
GAGAACCTGG TCGGCCTGCT CGAGAGCATG CCGATCGAGC GGGCGATGCT CGACCTGTTC
GCTGAGATGA CCTTGGCAGT GGGCGCAGAC GTCGCGGACG TGGGCTGCGG CACCGGCCGG
CTTCTTCCCT ACCTGGCGAG CCGTGGCCTG TCGCCTCGCG GCGTGGATCT CTCACCCAAG
ATGATCGAGG CGGCACAACG GGACAACCCC GGTTTCGCAT ACGAGGTCGC CGACTTGCGT
GACCTGCCGT TCGAGGACGC CTCGCTGGCC GGGGTGGTGT GCTGGTTCTC GCTGATCTAC
CTGGCACCAG ACGCCAGGGT CCCCGCCTTC AGCGAACTCG CCCGGGTGGT AAAGCCGGGC
GGCTACCTGG TGACTGCCTT CAAGCACGGC AATGGCACCG GGCACCGTAA CCCTCCCGGC
AGCCGCGTCG AGAGCTTCGG CATCGACTTC GACCGGTACT GGCTCTCCGC CCGGGAAATG
GAGGACCGCT TCGCCGCCGC CGGGTTCGCA CTGATCTTCC AGGGCAGCAC GCCACCCGAA
GAACCGGAGC CTCCATACGG GTACATGTTG GTCCGCAAGA CCGACTCCGG AAGCGCGTAG
 
Protein sequence
MDARTQELRD AHDVLSEWYA ENLVGLLESM PIERAMLDLF AEMTLAVGAD VADVGCGTGR 
LLPYLASRGL SPRGVDLSPK MIEAAQRDNP GFAYEVADLR DLPFEDASLA GVVCWFSLIY
LAPDARVPAF SELARVVKPG GYLVTAFKHG NGTGHRNPPG SRVESFGIDF DRYWLSAREM
EDRFAAAGFA LIFQGSTPPE EPEPPYGYML VRKTDSGSA