Gene Strop_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0929 
Symbol 
ID5057373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1038377 
End bp1040476 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content72% 
IMG OID640473199 
Producthypothetical protein 
Protein accessionYP_001157784 
Protein GI145593487 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1331] Highly conserved protein containing a thioredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.991859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.115087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGAC TCGCCGGCGC CACCAGCCCG TACCTGATTC AGCACAAGGA CAACCCGGTC 
GACTGGTGGC CGTGGTGTGC GGAGGCGTTC GCCGAGGCCC ACCGGCGGGA CGTCCCGATC
ATGATCTCGG TCGGCTACGC CGCCTGCCAC TGGTGTCACG TCATGGCGCA CGAGTCCTTC
GCCGACGAGC AGGTGGCCGC GCTGCTGAAC GAGGGCTTCG TGGCGATCAA AGTGGACCGC
GAGGAGCGTC CGGACGTCGA CGCCGTCTAC ATGACGGCGA CCCAGGCCAT GACCGGGCAG
GGTGGCTGGC CCATGACCGT CTTCGCCGCC CCGGACGGAA CCCCGTTCTT CTGTGGCACC
TACTTCCCGA AGCCCAACTT CCTCCGGCTG CTCCAGTCGG TCACCACCGC CTGGCAGGAC
CAGCGCAGCG CCGTGCTCCA GCAGGGTGCC GCGGTCGTCG AGGCGATTGG CGGTGCCCAG
GCGGTCGGGG GTCCATCCGC CCCGCTCACC GTTGACCTGC TCGACGCTGC TGCCGACCGG
CTTGGCGAGG AGTACGACGA GGCGAATGGC GGCTTCGGTG GGGCACCGAA GTTCCCGCCG
CACCTGAATC TGCTCTTCCT GTTGCGGCGG TACCAGCGCA CCGGCGACCA GCGGAGCCTG
GAGATCGTCC GGCACACCGC GGAGGCGATG GCCCGGGGCG GCCTCCACGA CCAACTCGCC
GGGGGCTTCG CCCGCTACTG TGTGGACGGG CAGTGGGCGG TGCCGCACTT CGAGAAGATG
CTCTATGACA ACGCCCTGTT GCTGCGCGTG TACACCCACC TGTGGCGGCT CACCGGTGAC
CCGATGGCCC GCCGCGTGGC ACGGGACACG GCCCGTTTCC TCGCCGACGA GCTGCACCGG
CCGGGCGAGG GGTTTGCCTC CGCGTTGGAC GCCGACGCCG ACGGGGTTGA GGGTCTGACC
TACGTCTGGA CCCCCGCCCA GCTCGTCGAG GCTTTGGGCG AGGAGGACGG CCGGTGGGCC
GCCGATCTGT TTGCGGTCAC CGAGCAGGGC TCGTTCACCC CGCACGCCGC CTCGCCGCCC
GGCGAAGCCC GGAGTGGGGC GGAAGCCGCT GCGCAGTCGG CCAGCGTGCT TCGGCTGGCC
CGGGACGTCG ATGATGCGAC GCCGGAGGTG CAGGCCCGCT GGCAGGAGAT CGCGCACCGG
TTGCTGGTGG TCCGCGACGC CCGCCCGCAG CCGGCCCGTG ACGACAAGGT GGTAGCTGCC
TGGAACGGGC TCGCGATCAC CGCGATCGCC GAGTTCCAGC AGGTCGCAGC CGGCTACGCG
GAGGATGCTC CCGGGCCGGA CGCCAACCTG ATGGAGGGCG TGACGATCGT CGCCGACGGT
GCCATGCGGG ACGCGGCCGA GCACCTGGCA AGGGTGCACC TCGTGGCCGG GCGGCTGCGG
CGCACGTCGC GGGACGGCCG GGTCGGCGAG GCCGCCGGAG TCCTGGAGGA CTACGGCTGC
GTGGCCGAGG CGTTCTGTGC GATGCACCAG CTGACCGGCG AGGGGCGGTG GCTGATCTTG
GCGGGGCAGC TCCTCGACGT GGCGCTGGAG CGGTTCGCCG CACCACAGGG CAGCTTCTAC
GACACCGCTG ACGATGCGGA GCGTCTGGTC AGCCGGCCGG CGGATCCCAC CGACAACGCC
ACCCCGTCCG GCCGGTCGGC GATCGTCGCC GCGCTGGTCG CATACGCGGC GTTGACCGGC
GAGACCCGCT ACCGGGAGGC GGCGGAGGCG GCGCTGGCCA CCGTGGCGCC GATCGTCGCT
GCACACGCCC GCTTCACCGG GTACGCGGCC ACCGCCGGCG AGGCGCTGCT CGTCGGTCCG
TACGAGATCG CGGTGGTGAC CGCCGATCCG GTCGGTGAGC CGTTGGTGCA CGCGGCGCAC
CGGCACGCCC CGCCCGGCGC CGTGGTGGTG GCCGGGCGGC CGGACCAGCC CGGGGTGCCG
CTGCTCGCCG GTCGGCAGAT GGTCGACGGG CAGGCCACCG CGTACGTCTG TCGGGGCTTT
GTCTGCGACC GGCCGGTAAC CGGAGTTGAC GCCCTGGTGG CGCAGCTGAC GGGTCGGTAG
 
Protein sequence
MNRLAGATSP YLIQHKDNPV DWWPWCAEAF AEAHRRDVPI MISVGYAACH WCHVMAHESF 
ADEQVAALLN EGFVAIKVDR EERPDVDAVY MTATQAMTGQ GGWPMTVFAA PDGTPFFCGT
YFPKPNFLRL LQSVTTAWQD QRSAVLQQGA AVVEAIGGAQ AVGGPSAPLT VDLLDAAADR
LGEEYDEANG GFGGAPKFPP HLNLLFLLRR YQRTGDQRSL EIVRHTAEAM ARGGLHDQLA
GGFARYCVDG QWAVPHFEKM LYDNALLLRV YTHLWRLTGD PMARRVARDT ARFLADELHR
PGEGFASALD ADADGVEGLT YVWTPAQLVE ALGEEDGRWA ADLFAVTEQG SFTPHAASPP
GEARSGAEAA AQSASVLRLA RDVDDATPEV QARWQEIAHR LLVVRDARPQ PARDDKVVAA
WNGLAITAIA EFQQVAAGYA EDAPGPDANL MEGVTIVADG AMRDAAEHLA RVHLVAGRLR
RTSRDGRVGE AAGVLEDYGC VAEAFCAMHQ LTGEGRWLIL AGQLLDVALE RFAAPQGSFY
DTADDAERLV SRPADPTDNA TPSGRSAIVA ALVAYAALTG ETRYREAAEA ALATVAPIVA
AHARFTGYAA TAGEALLVGP YEIAVVTADP VGEPLVHAAH RHAPPGAVVV AGRPDQPGVP
LLAGRQMVDG QATAYVCRGF VCDRPVTGVD ALVAQLTGR