Gene Strop_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0928 
Symbol 
ID5057372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1036918 
End bp1037628 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID640473198 
ProductB3/4 domain-containing protein 
Protein accessionYP_001157783 
Protein GI145593486 
COG category[S] Function unknown 
COG ID[COG3382] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.191069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0846004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCT TCCGCATCGC CCCCGCCGTC GCCGACGCCT TCCCAGGCAC TCTCATCGCC 
CTGGTAACCG CTACCGGCCT ACGCGGCCAC GAGCCCTGGC CCGACACCGC CTACGCCGTG
GACGATCTGG AACAGAAGCT TGCCGACGGC TCCTGGAGCC CCGCCGATGA GAGCGACCCC
CGCATCGAGT CGTGGCATAC CGCGTACCGC TCCTTCGGTA TCAACCCCCG TCGCGTCCGC
CCCAGCGTCG ACGCGCTCGG CCGCCGTATG GCCAAGAAGG GCACGCTGCC CCGCATCAAC
CCAGCCGTAG ATTCCTACAA CAGCGTCTCT ATCCGTCACG GACTGCCCGC CGGGGCCTTC
GACCTGGACC ACATCATGGG CGACGTCGAC ATCCGGCACG CGAATGGCAC CGAGGAGTTC
ACCCCGCTCG GCGAACCGGA CACCGTAGAG AACCCCAAGC TGGGCGAAGT CGTGTACGCC
GACTCTGCCG GCGTCCTGAC TCGCTGCTGG AACCACCGGG ACGCCCATCG GACCCGCGTC
ACCGAGGACT CCACCCACGT CGCCTTCATC CTTGAAACCC TCCAAGAACC CAGTCGCGGG
CATCTACTCC AAACGGCAGC CAAGGAACTA CGAGATCTGC TCACCTCTCA TGCGGAACAG
ACCGCCGTGC ACTACCTCAG CCCGGCCACG CCCCAGGTCA GCTCTGCCTG A
 
Protein sequence
MTVFRIAPAV ADAFPGTLIA LVTATGLRGH EPWPDTAYAV DDLEQKLADG SWSPADESDP 
RIESWHTAYR SFGINPRRVR PSVDALGRRM AKKGTLPRIN PAVDSYNSVS IRHGLPAGAF
DLDHIMGDVD IRHANGTEEF TPLGEPDTVE NPKLGEVVYA DSAGVLTRCW NHRDAHRTRV
TEDSTHVAFI LETLQEPSRG HLLQTAAKEL RDLLTSHAEQ TAVHYLSPAT PQVSSA