Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0928 |
Symbol | |
ID | 5057372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1036918 |
End bp | 1037628 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640473198 |
Product | B3/4 domain-containing protein |
Protein accession | YP_001157783 |
Protein GI | 145593486 |
COG category | [S] Function unknown |
COG ID | [COG3382] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.191069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0846004 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTCT TCCGCATCGC CCCCGCCGTC GCCGACGCCT TCCCAGGCAC TCTCATCGCC CTGGTAACCG CTACCGGCCT ACGCGGCCAC GAGCCCTGGC CCGACACCGC CTACGCCGTG GACGATCTGG AACAGAAGCT TGCCGACGGC TCCTGGAGCC CCGCCGATGA GAGCGACCCC CGCATCGAGT CGTGGCATAC CGCGTACCGC TCCTTCGGTA TCAACCCCCG TCGCGTCCGC CCCAGCGTCG ACGCGCTCGG CCGCCGTATG GCCAAGAAGG GCACGCTGCC CCGCATCAAC CCAGCCGTAG ATTCCTACAA CAGCGTCTCT ATCCGTCACG GACTGCCCGC CGGGGCCTTC GACCTGGACC ACATCATGGG CGACGTCGAC ATCCGGCACG CGAATGGCAC CGAGGAGTTC ACCCCGCTCG GCGAACCGGA CACCGTAGAG AACCCCAAGC TGGGCGAAGT CGTGTACGCC GACTCTGCCG GCGTCCTGAC TCGCTGCTGG AACCACCGGG ACGCCCATCG GACCCGCGTC ACCGAGGACT CCACCCACGT CGCCTTCATC CTTGAAACCC TCCAAGAACC CAGTCGCGGG CATCTACTCC AAACGGCAGC CAAGGAACTA CGAGATCTGC TCACCTCTCA TGCGGAACAG ACCGCCGTGC ACTACCTCAG CCCGGCCACG CCCCAGGTCA GCTCTGCCTG A
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Protein sequence | MTVFRIAPAV ADAFPGTLIA LVTATGLRGH EPWPDTAYAV DDLEQKLADG SWSPADESDP RIESWHTAYR SFGINPRRVR PSVDALGRRM AKKGTLPRIN PAVDSYNSVS IRHGLPAGAF DLDHIMGDVD IRHANGTEEF TPLGEPDTVE NPKLGEVVYA DSAGVLTRCW NHRDAHRTRV TEDSTHVAFI LETLQEPSRG HLLQTAAKEL RDLLTSHAEQ TAVHYLSPAT PQVSSA
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