| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0917 |
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| Symbol | |
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| ID | 5057361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1024216 |
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| End bp | 1026000 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640473187 |
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| Product | asparagine synthase (glutamine-hydrolyzing) |
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| Protein accession | YP_001157772 |
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| Protein GI | 145593475 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03104] asparagine synthase family amidotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.228251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGAC TTGCGGGAGA GTTTCGCCGT GATGGTTCCC GGGCCGACGT GGCTGCGGTG
GAGCGCATGG CGGCTACGAT GAGTGACCGA GGGCCGGACG ACAGCGGGGT ATGGGCACAG
GGAGCGATCG CCCTGGGGCA CCGTCGCCTG AAGATCATCG ACCTCTCGGC CGCCAGCGGA
CAGCCCGTCG CGGATGCCGC CTCCGGTCTC ACCGGCGTCT TCAACGGCTG CATCTACAAC
TACCGGGAAC TGCGGACCGA GCTGCAGGCC AAGGGGCACC ACTTCTTCTC CTCCGGGGAC
AGCGAGGTGG TGGTCAAGGC ATACGCCGAA TGGGGCTCCG ACTTCGTTGA CCACCTCGTC
GGCATGTTTG CCGTGGCGAT CACGGAGCGG GACACCGGCC GGCTCGTCCT GGCCCGGGAC
CGGCTCGGCA TCAAGCCGCT CTACCTGGCC GAGTCGCCGG GCGTGGTCCG CTTCGCCAGT
ACTTTGCCGG CGCTGCTGGC CGGCGGCGGC GTCGACACCG AGATCGACCC GGTCGCCCTC
GCGCACTACC TGAGCTTTCA CAGCATCGTG CCGCCCCCAC GCACCATCCT GCGCGGAGTG
GCCAAGCTCC CCCCGGCCAC CGTGCGGGTC TACGAGCCGG ACGGCCGCAG CCACGAGCGG
GTCTACTGGA ACCCGTCCTT CACCCGAAGC CCCGAACGCG CCGGCTGGTC GGCGGAGGAC
TGGCAGGACG CTCTGCTCGG CTCACTGACC ACCGCCGTAC GGCGACGGAT GGTCGCCGAC
GTACCGGTCG GCGTGCTGCT CTCCGGCGGC CTGGATTCGA GCCTGGTGGT GGCACTGCTC
GCCGGAGAGG GCCAGCGCGG CCTCTCCACC TTCTCCATCG GCTTCGACGC GGTCGGGGGT
CGGGAGGGCG ACGAATTCCG CTACTCGGAC CTGGTGGCGA AAACCTTCGA CAGTGACCAC
CACCAGATCC GCGTCCCGTC GCAGGACCTG GTGCCGCCAC TGGAGGCGGC TGTCGCCGCG
ATGAGCGAGC CGATGGTCAG CCATGACTGC GTCGCATTCT ACCTGCTCAG CCAGGAGGTG
GCCCGACACG TCAAGGTCGT CCAGTCCGGT CAGGGCGCGG ACGAGATCCT GGGCGGCTAT
CACTGGTACC CGCCGCTGGC ACAGGTCGCC CGGGAGGAGG CGCTCGAGAC GTACGCCCGC
GCGTTCTTCG ACCGGGACGC CGCCGGGCTG GCCCGGGTAC TCGACCCGGC CTGGCTCGCC
GCCGGTGACC CGGCACGCGA GTTCGTCGCC GCCCACCTGG CCCAGGCCGG GGCGCAGACC
GCGATCGACG CCGGCCTGCG GATCGACACA CAGATCATGC TGACCGACGA CCCGGTGAAG
CGGGTCGACA ACATGACCAT GGCGCACGGG CTGGAGGCCC GGGTTCCGTT CCTGGACCAC
GAGTTCGTGG AACTCGCCGC GACCTGCCCG CCGGAGCTGA AGCTGGCCCA GGGCGGCAAG
GGCGTGCTCA AGGAGATCGG CCGGCGGGTC CTCCCGCACG AGGTCATCGA CCGGCCGAAG
GGCTACTTCC CGGTCCCGGG CCTCACCCAC CTGGAAGGCA AGCTCCTGGA CCGGGTCCGC
GACGCGCTCT CGGCGCCGGA GGCTCATCGT CGAGGGCTGT ACCGCACCGA CTACGTCAAC
GCGCTGCTCG ACGACCCGAA CGCCGAACTG ACCCCGTTGA ACGGAAACAA GCTGTGGCAA
CTCGGACTCC TGGAAATGTG GCTCCAGAGC CACGGAATCG GTTGA
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| Protein sequence | MCGLAGEFRR DGSRADVAAV ERMAATMSDR GPDDSGVWAQ GAIALGHRRL KIIDLSAASG
QPVADAASGL TGVFNGCIYN YRELRTELQA KGHHFFSSGD SEVVVKAYAE WGSDFVDHLV
GMFAVAITER DTGRLVLARD RLGIKPLYLA ESPGVVRFAS TLPALLAGGG VDTEIDPVAL
AHYLSFHSIV PPPRTILRGV AKLPPATVRV YEPDGRSHER VYWNPSFTRS PERAGWSAED
WQDALLGSLT TAVRRRMVAD VPVGVLLSGG LDSSLVVALL AGEGQRGLST FSIGFDAVGG
REGDEFRYSD LVAKTFDSDH HQIRVPSQDL VPPLEAAVAA MSEPMVSHDC VAFYLLSQEV
ARHVKVVQSG QGADEILGGY HWYPPLAQVA REEALETYAR AFFDRDAAGL ARVLDPAWLA
AGDPAREFVA AHLAQAGAQT AIDAGLRIDT QIMLTDDPVK RVDNMTMAHG LEARVPFLDH
EFVELAATCP PELKLAQGGK GVLKEIGRRV LPHEVIDRPK GYFPVPGLTH LEGKLLDRVR
DALSAPEAHR RGLYRTDYVN ALLDDPNAEL TPLNGNKLWQ LGLLEMWLQS HGIG
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