| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0873 |
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| Symbol | |
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| ID | 5057316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 974725 |
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| End bp | 975675 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640473142 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001157728 |
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| Protein GI | 145593431 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.765071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATTC ACGTCGTCGT CGGCGCGGGC CCGGTCGGTG CCGCGACCGC CCGCCTCCTC
GCCGAGCGGG GGGAACGGGT CCGGGTGGTG AGCCGCCGCG GTGCTGGCCC CGAACATCCG
GCCATCGAGC CCATCGCCGC GGACGCGACC GACGCCGCCC ACCTGACCCG CCTGACGGCC
GGTGCCGCCG CCCTCTACAA CTGCGCCAAC CCCGCGTATC ACCGGTGGGA CATTGACTGG
CCACCGCTGG CTGCCGCGTT GCTCACCACC GCGGAGCGGA CCGGTGCGGT GCTCGCCACG
ATCGGCAACC TCTATGGGTA CGGCCCGGTC GACGGGCCGA TGACCGAGTC CACCCCGCTC
GCCGCGACCG GCGTCAAGGG GCGGGTACGC AATCAGATGT GGGCCGATGC GCTGGCCGCC
CACGAGGCGG GCCGGGCTCG GACGACCGAG GTCCGCGGCT CGGACTACCT CGGGATCGGG
GCCAACTCGC TTACCACCCT GGTCCTGTCG AACGTACTGA CCGGCCGCCG AGTGGTCTTG
CCGGTCGACT TCGACGTCCC GCACACCATC ACCTACGTCG GCGACGTAGC CAGAACCGTG
GTCGCCGCCG CCACCGACCC GGAGGCCTGG GGGCGGGCCT GGCACGTGCC CAGCCCACCC
GCGCTCAGCG TGCGGGAACT GGCCACTCGC GCCGCGGCCC TGGCCGGTGC GCGCACGCCG
CGGCTGACTC GGCTGCCCTA CCCGGCGCTT TGGCTGGGCG GCCTGGTCAA TCCGTTTCTC
CGGGAGCTGC GGGAGACGGC ATACCAGTTC GTTCGTCCGT ACCTGTTGGA CTCCTCGGCC
GCCCAGCGGG CCCTTGGGAT CGAACCGACC GCGCTCGACG AGGCCCTCAC CGAGAGCCTC
GGTGCGCTGC GCCCGAACCC CGGTGCCAGC TCGGCGACGC TCAGTTCCTA A
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| Protein sequence | MAIHVVVGAG PVGAATARLL AERGERVRVV SRRGAGPEHP AIEPIAADAT DAAHLTRLTA
GAAALYNCAN PAYHRWDIDW PPLAAALLTT AERTGAVLAT IGNLYGYGPV DGPMTESTPL
AATGVKGRVR NQMWADALAA HEAGRARTTE VRGSDYLGIG ANSLTTLVLS NVLTGRRVVL
PVDFDVPHTI TYVGDVARTV VAAATDPEAW GRAWHVPSPP ALSVRELATR AAALAGARTP
RLTRLPYPAL WLGGLVNPFL RELRETAYQF VRPYLLDSSA AQRALGIEPT ALDEALTESL
GALRPNPGAS SATLSS
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