Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0864 |
Symbol | |
ID | 5057307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 968082 |
End bp | 968906 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640473133 |
Product | HAD family hydrolase |
Protein accession | YP_001157719 |
Protein GI | 145593422 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1877] Trehalose-6-phosphatase |
TIGRFAM ID | [TIGR00685] trehalose-phosphatase [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCCGT TGAATCTGGG CAAGCAGCCG CCGAAAACCC CGTTCACCGC CGACCTCGCC TGGCAGGCAA CCGCTGCCCG GGCCGCCGGA ACCGTCCTCT TCTTCGACTT CGATGGCACC CTCGCACCGG TCCGGGACGA CCCGACGTCG GTACACCCCA CGCCGAGGGT GCTCACCGCC ATCGAGGCGC TCGCTCCCGT CGTGCGCCGG ATCGCGATCG TCTCCGCGCG CCCGGTCGAC TTCCTCCGCG ACCGACTCGG CGATCTCGCC GGTGTCGACC TCTACGGCCT CTACGGGCTG GAGCACAGCC ACTCCGGCGG CGAGACCGTC ACCGAGCCGG CGGCACTGCC CTGGGTGCCG ACCATGGCGG ACCTCGCCGA CGAGGCCCGC ACCGAGCTGC CTGCGGGAGC CCTGGTGGAG TACAAACGGC TCTCGGTGGC GCTGCACTGG CGGACCGTCC CGCAGCTTGG CCCGGCGGTA ACACGATGGG GTTCAGCCCG GGCCGAGCAG CTCGGTCTCC GGGTTCAGAC CGGACGGATG GTTCTGGAGC TGAAGCCGCC GGTCGACCGG GACAAGGGCA TGGTCATCGA CGAGGTGGTG CGGGACGCGG AGGCCGCCTG GTACTTCGGC GACGACGTAT CGGACATCAA GGCCTTCACG GCGCTGCGAG CCCGCGCCGC CGCCGAACCG CACTTCTTCG GCGTCTGCGT CGCCGTCGCC AACCCGGAGA CCGGCGAAGA GGTTGCCGCC GCCGCGGACC TGACCATCGA CTCGCCAGCA GACCTCGGCG ACTTCCTCAC CGACGCCGCG CGCCGGCTGG CCTGA
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Protein sequence | MPPLNLGKQP PKTPFTADLA WQATAARAAG TVLFFDFDGT LAPVRDDPTS VHPTPRVLTA IEALAPVVRR IAIVSARPVD FLRDRLGDLA GVDLYGLYGL EHSHSGGETV TEPAALPWVP TMADLADEAR TELPAGALVE YKRLSVALHW RTVPQLGPAV TRWGSARAEQ LGLRVQTGRM VLELKPPVDR DKGMVIDEVV RDAEAAWYFG DDVSDIKAFT ALRARAAAEP HFFGVCVAVA NPETGEEVAA AADLTIDSPA DLGDFLTDAA RRLA
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