Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0862 |
Symbol | |
ID | 5057305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 965985 |
End bp | 967148 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640473131 |
Product | geranylgeranyl reductase |
Protein accession | YP_001157717 |
Protein GI | 145593420 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGACCA GGCTGGCCGA CGGGGACGAC GAGTTCGACG TCGTGGTGGT GGGGGCGGGG CCGGCCGGCT CGGCCGCCGC CATCGCCGCC CGCCGGACGG GAGCCCGGGT GCTCCTGCTG GATCGGGCCG ACTTCCCCCG GGACAAGGCC TGCGGGGACG GGATCGCCGC GCACGCGTTG GACGTCCTGG CCGGGCTGGG CGTATCCGAC CCGGTAGCCG GGTACCCCTC GCTGCCCGCG CTTCGCCTGG TCGCCCCGGG CGGTCCGGCG GTGGCGCGGG CGCTACCCCG TCCGGCGTAC ACGGTGCCCC GAACCGTCTT CGATGCTCGG TTGGTCGCGG CGGCGGTCGC GGCCGGTGCC CAGCTGCGCC GGCACGTGGT ACGTCGCGTC GAGGTGCGGG CGGACCGGGT CGTGCTCGAC GGGCGGATCG CCGGGCGGGC CGTGGTGGGT GCCGACGGTG CGGGCTCGGT CGTGCGCCGG GCACTGGGAT GCCCCCCGAA CCCGGACCGT CACCTGGCCC TGGCGATCCG GGGCTACGCG TCTGCGCCGT CCGGCCCACC AGAGCAGCTC ATCGTCACGT CAGCCACCCG TTGGCCGGCG TACGCCTGGT CCTTCCCGAT CGGCGACGGA CGGGCGAACG TCGGGTACGG GGAGGTGCTA CGCGGTGAGT CGCTGACCCG GGAGCACCTC GTTGCGCGGC TGGGAGCGTT GCTGTCCGGG GTCGATCCGG CGGCGGTCAC CGCCCTGCGG GCCCATCACC TACCGCTCTC CACCCACCGG CCGGTGCCGG GCCGCGGCCG GGTGCTGCTG GCAGGCGACG CGCTCTCGCT GATCAACCCG TTCACCGGGG AGGGGATCTT CTACGCGCTG CTCTCCGGAG CGCTCGCCGG CGCCGCGGCG AGCCGTACGC CGGAGCAGGC CGCTCGGGGC TACGCCGCGG CGCTTCGTCG TCGGCTCGGT GGTCATCTAC GGCACAGTTC GGTTGCGGCC TGGCTCGCCC GACGGCGGTC GGTGGTTGAC GCGGCGGTCT GGGCAGCTAG CCGCGATGAC CAGGTGTATC GGGCGGTGGT GGAGTTGGGG CTCGGCGACG GCCGGCTGGA CATCCGGACG CTGGCCATGA TCGGGCGTGG CCTGGCCCCC GGGGTTCGGC ATCCCGAGCT GTGA
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Protein sequence | MVTRLADGDD EFDVVVVGAG PAGSAAAIAA RRTGARVLLL DRADFPRDKA CGDGIAAHAL DVLAGLGVSD PVAGYPSLPA LRLVAPGGPA VARALPRPAY TVPRTVFDAR LVAAAVAAGA QLRRHVVRRV EVRADRVVLD GRIAGRAVVG ADGAGSVVRR ALGCPPNPDR HLALAIRGYA SAPSGPPEQL IVTSATRWPA YAWSFPIGDG RANVGYGEVL RGESLTREHL VARLGALLSG VDPAAVTALR AHHLPLSTHR PVPGRGRVLL AGDALSLINP FTGEGIFYAL LSGALAGAAA SRTPEQAARG YAAALRRRLG GHLRHSSVAA WLARRRSVVD AAVWAASRDD QVYRAVVELG LGDGRLDIRT LAMIGRGLAP GVRHPEL
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