Gene Strop_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0862 
Symbol 
ID5057305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp965985 
End bp967148 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content75% 
IMG OID640473131 
Productgeranylgeranyl reductase 
Protein accessionYP_001157717 
Protein GI145593420 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGACCA GGCTGGCCGA CGGGGACGAC GAGTTCGACG TCGTGGTGGT GGGGGCGGGG 
CCGGCCGGCT CGGCCGCCGC CATCGCCGCC CGCCGGACGG GAGCCCGGGT GCTCCTGCTG
GATCGGGCCG ACTTCCCCCG GGACAAGGCC TGCGGGGACG GGATCGCCGC GCACGCGTTG
GACGTCCTGG CCGGGCTGGG CGTATCCGAC CCGGTAGCCG GGTACCCCTC GCTGCCCGCG
CTTCGCCTGG TCGCCCCGGG CGGTCCGGCG GTGGCGCGGG CGCTACCCCG TCCGGCGTAC
ACGGTGCCCC GAACCGTCTT CGATGCTCGG TTGGTCGCGG CGGCGGTCGC GGCCGGTGCC
CAGCTGCGCC GGCACGTGGT ACGTCGCGTC GAGGTGCGGG CGGACCGGGT CGTGCTCGAC
GGGCGGATCG CCGGGCGGGC CGTGGTGGGT GCCGACGGTG CGGGCTCGGT CGTGCGCCGG
GCACTGGGAT GCCCCCCGAA CCCGGACCGT CACCTGGCCC TGGCGATCCG GGGCTACGCG
TCTGCGCCGT CCGGCCCACC AGAGCAGCTC ATCGTCACGT CAGCCACCCG TTGGCCGGCG
TACGCCTGGT CCTTCCCGAT CGGCGACGGA CGGGCGAACG TCGGGTACGG GGAGGTGCTA
CGCGGTGAGT CGCTGACCCG GGAGCACCTC GTTGCGCGGC TGGGAGCGTT GCTGTCCGGG
GTCGATCCGG CGGCGGTCAC CGCCCTGCGG GCCCATCACC TACCGCTCTC CACCCACCGG
CCGGTGCCGG GCCGCGGCCG GGTGCTGCTG GCAGGCGACG CGCTCTCGCT GATCAACCCG
TTCACCGGGG AGGGGATCTT CTACGCGCTG CTCTCCGGAG CGCTCGCCGG CGCCGCGGCG
AGCCGTACGC CGGAGCAGGC CGCTCGGGGC TACGCCGCGG CGCTTCGTCG TCGGCTCGGT
GGTCATCTAC GGCACAGTTC GGTTGCGGCC TGGCTCGCCC GACGGCGGTC GGTGGTTGAC
GCGGCGGTCT GGGCAGCTAG CCGCGATGAC CAGGTGTATC GGGCGGTGGT GGAGTTGGGG
CTCGGCGACG GCCGGCTGGA CATCCGGACG CTGGCCATGA TCGGGCGTGG CCTGGCCCCC
GGGGTTCGGC ATCCCGAGCT GTGA
 
Protein sequence
MVTRLADGDD EFDVVVVGAG PAGSAAAIAA RRTGARVLLL DRADFPRDKA CGDGIAAHAL 
DVLAGLGVSD PVAGYPSLPA LRLVAPGGPA VARALPRPAY TVPRTVFDAR LVAAAVAAGA
QLRRHVVRRV EVRADRVVLD GRIAGRAVVG ADGAGSVVRR ALGCPPNPDR HLALAIRGYA
SAPSGPPEQL IVTSATRWPA YAWSFPIGDG RANVGYGEVL RGESLTREHL VARLGALLSG
VDPAAVTALR AHHLPLSTHR PVPGRGRVLL AGDALSLINP FTGEGIFYAL LSGALAGAAA
SRTPEQAARG YAAALRRRLG GHLRHSSVAA WLARRRSVVD AAVWAASRDD QVYRAVVELG
LGDGRLDIRT LAMIGRGLAP GVRHPEL