Gene Strop_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0852 
Symbol 
ID5057295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp954861 
End bp956726 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content71% 
IMG OID640473121 
Productprotein kinase 
Protein accessionYP_001157707 
Protein GI145593410 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACG CACTTCCGGA ACTCGTCGCT GGCCGATATC GGCTCTTGTC GCCGCTCGGT 
CAGGGTGGCA TGGGTCGGGT GTGGAAGGCG CGCGACGAGG TGCTGCACCG AAACGTGGCG
ATCAAGGAGT TGGTCCCGCC GCCCAGCCTC ACCGACGAGG AACGCCGCGA GATGCGGGAG
CGTTCGCTCC GCGAGGCGCG GGCGATCGCT CGACTCAATC ACGTCAATGT TGTCCGCATC
TTCGACGTGC TGCGTACCGA TGGCGATCCG TGGATCGTGA TGGAGTACGT GGCCTCGAAG
TCCCTCCAGG ACACCCTCGC CGAGCAGGGG CCGGTGTCGC CGGCTCGGGC GGTGCAGATC
GGCCTCGGGG TGCTCGGTGC GTTGAAGGCG GCGCACAAGG CGGGGGTGAT GCACCGTGAC
GTCAAGCCCG GCAACGTGTT GCTTGGCGAG GACGGGCGGG TGGTGCTGAC CGACTTTGGT
CTGGCTACCG TCCCAGGTGA CCCGAATGTC ACCCGCACCG GGATGGTGCT CGGCTCCCCC
GCGTACATCG CTCCGGAGCG GGCACGGGAC GGCACCGCGG GGCCGGAGGC GGACCTCTGG
TCGCTGGGCG CGACCCTGTA CGCGGCGGTG GAGGGAAAGT CGCCGTATGC GCGTACCTCG
GCGATCGCCA CCCTCGCGGC GCTGGCCACC GAGCCACCGC CACCACCGAA GAACGCCGGC
CCGCTGCGGC CGGTGCTCAA CGGCCTGCTC CGCAAGGATC CGACCGACCG GATCACCGCC
GAGGTGGCGG AGCGGCTACT ACGCCGAGCC GGTGGGAAGC GTTCGCAGCT CATCCCGCTG
TTGTCCGGCG TACGACGGCC GGGACCACAT CGTCGCGAGG GGCAGGCGCC AGCGGTGGTG
CCGGCACCAC GACCGGTGTC GAAGCTGCCC GAGTCCTCGG CGTCGGCCCC ACCGGCACCC
CCGTCGTCGC CCCATGCGGC GCAACCGGCG GTCGAGCCAT CGGCCGATGC CGCTCCCACG
GCGAAGGTGA CCGGTGCCGG TCCGACCGCG CCGGTCGACC CCCCGGCGGC CCGAGTGGAC
GCCGACCCGA CAGCGAAGCT CGGCGGGCCG GCGGCTGCCC CGGCATCGTC CGTGCCGCCA
CCCGGCGGGG CCGCCGCCGG GACGAAGCGT TACGCCACCC GCCGCAATCT GTTGATCGGT
GCCGTGGTGG CCTTGCTCCT GCTCGGTCTC GTGGTGGCCT ATCCCCAGCT CACCATGGAG
GACGACGGAG TTGATCCGGG TACCGTTGCG ACCGATGCCG GGTCCACCGC CGCTCCGGCC
AGCTCGACTC CGAGCGTCAC GGCGTCGGTG AGTACCCCGC CGACCAGCGC CAGCCCGACC
CCGAGCGGCA CGGCGGGCGC GGCCCTGCCG GCCGGCTGGA GGCTGCACCA GGACCCCACG
GGATTCGTGG TGCCGGTGCC GCCCGGGCTC GACCTGGACT ACCGCCGGCA ATGGGGTCGG
GGGCCGGAGG ACTATCGGGT CCGGTTCTCC GATGGTCAGG GGCGGGCCCT GCTCATCGAC
CAGACGACGA CGCCACTGGA CGATGCCGCG GCCGACTGGC GTCGGCAGGA GGCCGCGCGA
CGCGGCAACT ACAGCGGCTA CCAGCACGTC AAGATCGCTT CAGTGGACTA CTGGGATGAG
GCCGCCGACT GGGAGTGGAT CTTCAACGAC GATTACGGAC GTCGGTTACA CGTCCGTAAT
CGTGGCTTCG TGACCGCGCC CGACAAGGGT TACGCGATCC GCTGGGACTG CCCGGAGGAC
GACTGGGCGG CGAACGAGTC GACTTTCGAG ATCATCGCCG CGGGGTTTGT GCCGGTACGT
AGCTGA
 
Protein sequence
MSNALPELVA GRYRLLSPLG QGGMGRVWKA RDEVLHRNVA IKELVPPPSL TDEERREMRE 
RSLREARAIA RLNHVNVVRI FDVLRTDGDP WIVMEYVASK SLQDTLAEQG PVSPARAVQI
GLGVLGALKA AHKAGVMHRD VKPGNVLLGE DGRVVLTDFG LATVPGDPNV TRTGMVLGSP
AYIAPERARD GTAGPEADLW SLGATLYAAV EGKSPYARTS AIATLAALAT EPPPPPKNAG
PLRPVLNGLL RKDPTDRITA EVAERLLRRA GGKRSQLIPL LSGVRRPGPH RREGQAPAVV
PAPRPVSKLP ESSASAPPAP PSSPHAAQPA VEPSADAAPT AKVTGAGPTA PVDPPAARVD
ADPTAKLGGP AAAPASSVPP PGGAAAGTKR YATRRNLLIG AVVALLLLGL VVAYPQLTME
DDGVDPGTVA TDAGSTAAPA SSTPSVTASV STPPTSASPT PSGTAGAALP AGWRLHQDPT
GFVVPVPPGL DLDYRRQWGR GPEDYRVRFS DGQGRALLID QTTTPLDDAA ADWRRQEAAR
RGNYSGYQHV KIASVDYWDE AADWEWIFND DYGRRLHVRN RGFVTAPDKG YAIRWDCPED
DWAANESTFE IIAAGFVPVR S