| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0847 |
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| Symbol | |
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| ID | 5057290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 947079 |
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| End bp | 948734 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640473116 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001157702 |
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| Protein GI | 145593405 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.182746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAGC AGGGACGCGG CCGCTGGTGG GGGCTGCTCG CCATCAGTCT CGGGGTCGCC
ACGATCATCG TCGACGTGAC GATCGTCAAC GTCGCCGTCC CTGCGATCAT CGCTGACCTC
GGCGTCAGCT CCGCCGGGGC GCAGTGGGTC CAGGAGGCGT ACACCCTCGT CTTCGCCTCC
CTGCTCCTGG TCGTGGGCCG CTTCGCTGAT CGCGCCGGCC GACGACGAAT GTTCGTCGTC
GGCGTGCTGG TCTTCGTCGT CGCCAGCCTG CTCGCCGCGT CCGCCGGCTC CGGTGCCGAG
CTGATCGGGG CGCGGGTGCT CCAAGGGCTC GGCGGCGCGA TGATGCTGCC CACCTCACTG
TCCCTGCTGA ACGCGAACTT CGTCGGCCGG GAACGGGCGA TCGCCTTCGC GGTCTGGGGC
TCCACCATCG GCGGGGCCGC CGCGCTCGGC CCGCTGCTCG GCGGCTGGCT CACCACCGAG
CTCTCCTGGC GGTGGGCCTT CGGCATCAAC CTCCCGATCG GCGTGCTGGT CGTCGTCGCC
ACGCTCGCGC TGGTCCCCGA ATCCCGCGAC GACCGGGTCG AGCGCGGCAT CGACCTGGTC
GGCGCGTTGC TGTCGGTGCT CGGTATGACC GGCGTCGTCT TCGCCCTCAT CGAGGGGCGC
ACGTACGGCT GGTGGGGGTT GGCGAAGCCG ATCACCCTCT TCGGCCTGGA CTGGCCCGCC
GCGATCTCAC CGGTGCCGGT CGTCGGGCTG GCCGGCCTGG CCGCCCTTGC CCTTCTGGTC
ACCCACCAGG TGCGCCGCAA CCGGCTCGGC CGGACGGCGC TGATCGACCT GTCGCTGTTT
CGGATCGGCT CCTTCCGGGT CGGCGTCACC GCCGCCGCGA TCGTCAGCCT GGGCGAGTTC
GGCCTCCTCT TCGCGCTCCC GCTCTGGTAC CAGAACGTGC TCGGCTACAG CGCCTTCCAC
ACCGGACTGG CGCTGCTGCC CCTCGCCGTC GGGAGCTTCC TCTCCAGCGC ACTCGGAGCG
CTTCTCGTCA AACGATGGGG TACCACCCGG GTGGTGCAGC TCGGCGTAGC CGCGGAGATC
GCCGGTATCG CCGGACTCGG CCTCGTGGTC GCCCCCGACA CGCGCTGGTG GGCTCCGCTT
GGCCTGCTCT TCGTCTACGG CGTCGGCGTC GGTCTGGCCA CCGCCCAGCT CACCGGGGTG
TCGCTGCGAG AGGTGCCGGT CCGGCGCAGC GGCCAGGGGT CCGGGGTGCA GAGCACCGCG
CGGCAGGTCG GCTCCGCCCT CGGCATCGCC GTGCTCGGCA CGGTCCTCTT CGCCGGGCTC
AGCGGGCTCC TCGGCGCGCG GCTCGCTGAT CGGTCCGAGC TCGATCCCAC CCAGCGCGAA
CAGGTGGTGA CCGAGGTCCG GGAGAGTGGC GGAGCGGCGA TCGCCGGGCT CGCCGCCGAC
CCCCGCACCG CGCCGATCGC CGAGGAGGCG AAGGCCGCCT TCGCCGACGC CACCCGGTAC
GCCGCCTTCA CCGCCGCCGG CTTCCTGCTC ATCGGGCTGA TCGCCTGCGC CCGACTGCCC
CGGGACCGCC CCGGGGCAGC GGAGCCGGCG CCGACGCCAC AGCCGGCGGC CAGCCCCGCC
GGTCAGACCG CGGAGGGGCT GGCCGCACCG GGGTGA
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| Protein sequence | MPEQGRGRWW GLLAISLGVA TIIVDVTIVN VAVPAIIADL GVSSAGAQWV QEAYTLVFAS
LLLVVGRFAD RAGRRRMFVV GVLVFVVASL LAASAGSGAE LIGARVLQGL GGAMMLPTSL
SLLNANFVGR ERAIAFAVWG STIGGAAALG PLLGGWLTTE LSWRWAFGIN LPIGVLVVVA
TLALVPESRD DRVERGIDLV GALLSVLGMT GVVFALIEGR TYGWWGLAKP ITLFGLDWPA
AISPVPVVGL AGLAALALLV THQVRRNRLG RTALIDLSLF RIGSFRVGVT AAAIVSLGEF
GLLFALPLWY QNVLGYSAFH TGLALLPLAV GSFLSSALGA LLVKRWGTTR VVQLGVAAEI
AGIAGLGLVV APDTRWWAPL GLLFVYGVGV GLATAQLTGV SLREVPVRRS GQGSGVQSTA
RQVGSALGIA VLGTVLFAGL SGLLGARLAD RSELDPTQRE QVVTEVRESG GAAIAGLAAD
PRTAPIAEEA KAAFADATRY AAFTAAGFLL IGLIACARLP RDRPGAAEPA PTPQPAASPA
GQTAEGLAAP G
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