Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0823 |
Symbol | |
ID | 5057266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 917312 |
End bp | 918988 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640473092 |
Product | ABC transporter, transmembrane region, type 1 |
Protein accession | YP_001157678 |
Protein GI | 145593381 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0882917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCGTC GTCCCTTCGA TCCACGTCTG CTGCGACGGG TCCCCGCGGC CCGGCGCGAC CTCGCCGTGC TCGCGCTCCT CGGCGTACTC GCCGCGGGCC TGGTGCTGGC GCAGGCGACT GCGCTCGCCG CGCTGCTCGC CACCGCCTTC GACGGGCAGC TCAACCGGCC TGCGCTGGCC GCCTTCGTCG CCGCGATCAG CGCCCGGTCA CTGCTGGTAT GGGCGCAGGG GACCGTGTCG GCACGGGTCG CCGCGACGGT CAAGGCAGCG CTGCGGGCCG AGCTGCTCGC CGCGGTCGGT CGACGCGGCC CGACCTGGGT CGCCGGGCAG CGGGCGGGAC AGCTGGCAAC GCTGGCCGGG CGGGGGCTGG ACGCGCTGGA CGCTTACTTC ACCGGCTACC TGCCACAACT CGTACTCAGC GTCACGGTGC CGATCGCCGT GCTCGCGCGG ATCTTCGTCG CCGACTGGAG TTCCGCCGTC ATCATCGCGA TCACCCTCCC CCTCATTCCG ATCTTCGGAG CGCTGCTCGG CTGGCAGGCG CAGGCTGCGA CGGAACGTCA GTGGCGGCGG CTGGCGCTGC TCGGCGGGCA CTTCCTCGAC ATGATTGCCG GGCTCCCGAC GCTGCGGACC TTCGGCCGTG CCCGGGGGCA GACCGAGGTG GTCCGCCGGA TGGCCGACGG GCACCGGGTG GCAACCATGC GGACGCTGCG CATCGCGTTC CTCTCCGCAC TGGTGCTGGA GTTGGTCGCC ACCCTCTCCG TCGCGCTGGT AGCGGTGCCG GTCGGCGTCC GACTGCTCGG CGGCGGACTG ACCTTGCAGA CCGCGCTGCT GGTGTTGCTA CTCACCCCCG AGGCGTACCT GCCGTTGCGG ACTGCCGGCA GCCGCTTCCA CGCCAGCATG GAGGGGCTCA CCGCGCTGGA CGAGGCACTT ACCCTCTCCG CCACGGCACC CGACGCCGAC ACCGGAGCGG GCCCGGCCGA GCCGGACGGC CGGGGCGTGA TCCGGTTCGA GGGCGTCACC GTCGCCTACG ACCGGACCAC GGCGCTGCGT GATGTCACGC TGACCATCCG GCCCGGCGAG CGGATCGCGG TGGTCGGGCC GAGCGGCGCC GGCAAGAGCA CCTTGCTGAA TCTGCTGCTC GGATTTGTGT CACCCACCTC CGGCCGGGTC ACCGTGGACG GCGTCGACCT GGCCCAGGCT GACCTGGACG CCTGGCGCCG CCACCTCGCC TGGGTTCCGC AGCGGGCCCA CCTCTTCGCC GCCTCACTGG CGGACAACAT CCGTCTCGGC GCCCCCGATA CGCCCGACGC CGCGTTGGCC GACGCCGTGC GGGACGCCGC GCTGACCGAT GTCGTCGCCG CCCTTCCCGA CGGGCTGGCC ACCCGCCTCG GTGAACGGGG GTACGGCCTC TCCAGCGGTC AACGACAACG GGTCGCGCTG GCCCGTGCCT TCCTACGGGA CGCGCCGGTG GTGCTGCTCG ACGAGCCGAC TGCCCGCCTG GACTCGGGGA GCGAGTCAGC CGTCCTCCAG GCCACCCGCA CGCTGGTGGC CGGCCGCACG GCGCTGCTGG TGGCCCACCG TCCCGCGCTG CTGGCCGACG CGGACCGTGT GCTGCGGGTC GCCGACGGAC GGATCACCGA GCTCACCCCG ACCCCCGCCG GAGGGACTAC CCGATGA
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Protein sequence | MNRRPFDPRL LRRVPAARRD LAVLALLGVL AAGLVLAQAT ALAALLATAF DGQLNRPALA AFVAAISARS LLVWAQGTVS ARVAATVKAA LRAELLAAVG RRGPTWVAGQ RAGQLATLAG RGLDALDAYF TGYLPQLVLS VTVPIAVLAR IFVADWSSAV IIAITLPLIP IFGALLGWQA QAATERQWRR LALLGGHFLD MIAGLPTLRT FGRARGQTEV VRRMADGHRV ATMRTLRIAF LSALVLELVA TLSVALVAVP VGVRLLGGGL TLQTALLVLL LTPEAYLPLR TAGSRFHASM EGLTALDEAL TLSATAPDAD TGAGPAEPDG RGVIRFEGVT VAYDRTTALR DVTLTIRPGE RIAVVGPSGA GKSTLLNLLL GFVSPTSGRV TVDGVDLAQA DLDAWRRHLA WVPQRAHLFA ASLADNIRLG APDTPDAALA DAVRDAALTD VVAALPDGLA TRLGERGYGL SSGQRQRVAL ARAFLRDAPV VLLDEPTARL DSGSESAVLQ ATRTLVAGRT ALLVAHRPAL LADADRVLRV ADGRITELTP TPAGGTTR
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