| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0721 |
|---|
| Symbol | |
|---|
| ID | 5057162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 805382 |
|---|
| End bp | 806302 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640472988 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157576 |
|---|
| Protein GI | 145593279 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.117715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTCTTCG TGTCCGCCCT CCCGTCCCGG CTGCCACCGG AGCCGTTGAC CGTCGGTGCG
CTCGCCCTCG CCGTGCTCGC CGTGTCGTCC TCAGCGCCGC TGGTGGCCTT CGCCGCCGCA
CCGGCCCTGG CGGTAGCCTT CTGGCGCAAT CTGCTCTCGA CCGCGGTGCT CGCTCCGGCC
ACCCTGCTCC GGCGGCGGGC AGAGCTGCGG GCGTTGGCCG CTCCGGCCGG GCGTCGAGCG
GGTCGGTACT GCGTCTTCTC CGGTGTCGCG CTCGCCGCGC ACTTCGCCAC CTGGATGCCG
AGCGCCAAGC TCACCACGGT CGCGGCGGCC ACCGCGCTGG TCGCCACCCA ACCCGTCTGG
CAGGGGCTGA TCGCGCAGGC CCAGGGGCGG CGACTGCCGA GGGCGATGTG GGCCGGCGTC
GGTCTGGCGG TCGCTGGCGC GGTACTGGCC ACCGGGGCCG ACCTCGCGCT CTCCGGGCCG
GCGTTCCTCG GTGATCTGCT CGCGATCGTC GGCGGAATGT TCGCCGCGGT CTACACGGCC
CTGGGGGAGC AGGCCCGTCG AACGGTCAGC ACCACCACGT TCACCACCGT CTGCTATGGC
GTCTGTGCCC TGGTCCTGCT CGTGGTCTGC TGGGTCGGTG GGGTGCGGCT GTCCGGCTTC
GACACCCGTA CCTGGCTTGC GGTGCTGGCG CTGGTGGCCG GTGCCCAGCT GCTTGGTCAC
TCGATGTTCA CCTACGCGCT GCGTCGGGTC TCGGCCACCA CGATCAGTAT GTTGATCTTG
TTGGAGGCGC CGGGTGCGGC ACTGATCGGC TGGCTCTGGC TGGGCCAGCT GCCGCAGCCG
TCAGCGCTGC CGGGACTGGC GCTGCTCCTG GCAGGCGTCG CTGTGGTGAT CCACAGCAGC
GCGCGGGGTC ACCGTGCCTG A
|
|---|
| Protein sequence | MLFVSALPSR LPPEPLTVGA LALAVLAVSS SAPLVAFAAA PALAVAFWRN LLSTAVLAPA
TLLRRRAELR ALAAPAGRRA GRYCVFSGVA LAAHFATWMP SAKLTTVAAA TALVATQPVW
QGLIAQAQGR RLPRAMWAGV GLAVAGAVLA TGADLALSGP AFLGDLLAIV GGMFAAVYTA
LGEQARRTVS TTTFTTVCYG VCALVLLVVC WVGGVRLSGF DTRTWLAVLA LVAGAQLLGH
SMFTYALRRV SATTISMLIL LEAPGAALIG WLWLGQLPQP SALPGLALLL AGVAVVIHSS
ARGHRA
|
|---|
| |