Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0665 |
Symbol | |
ID | 5057106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 747829 |
End bp | 749046 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640472932 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001157520 |
Protein GI | 145593223 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.910637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGGTA TGTCGAGGAA ATTCTCTGTT CGCCTCCTCG TGGGGTCGGT AGTACTAGCC CTCGCCGCCC TGGCAGTCGC CACCGGCGGG GGCGAATTGG AGCGAGACAG CAGGGCTACC CCGGAATGGG AGAGGCCGTT TCCGGTCGCG GAGAGCGTCT ATCCGTTCCC GTCAGAGGTC TACCAGTGGC GTGGGTTCGC ATACCACTAT GTGGATGTGC CGCCAGCGGC GGGCGGCGCG CCCAAGGGTA CCGTTTTGGC GGTACACGGG AACGGCACCT GGAGCATGAT CTACCGGAAA ATCGTCGACC CGTTGAGCGC GGCTGGCTTT CGGGTGATCC TGGTCGACCA CCTCGGTTTC GGCTTCTCGG ACAAACCGGG GACCGGCGAG TTCGACTACA TGCCGAGTTC GCACACGACG GTGCTGCGGG ACTTCATCGC CGACCTGGCC CTGGACGATC TCTACCTGGT ACTCCAGGAT TGGGGCGGAC CCATCGGACT GGCCGCCGGA GTCGCCACCC CGGAGAAGGT GCGTGGTCTC GTGCTGATGA ACACCTGGGC GTGGAAGCTC GACCACATCG AGCAGGGACA GACCGGATTC ATGCACGCGG TGCACGACCG TGGGCGCCAT GCGCAGCTGG AACCAGAGTT CTACACGCAG GGCGAGCTCA TCCGCCGCGG TGCGATCGGG GTCGCCGAAC GCAACGCGGT GGAAGGATCG GCGGAGTACG CGGCACTGCG GGACGCGATG TGGGGGCCCT ACCTCACCCT GGATCCCCCG CACGAGCTGC GCTATCCGGA GGTGAGCCAG CCCGTGCACA TCTCCGCCAC GGCGACCGTC GCGGACGGCG CCTTCCTCGA TCAGCTCGAC CGCGAGTTGG CCACGCTGCG GTCGAAGCCG GTCTTCTTCG CCTTCGGCGA CGATACGGCC TTCGGGCCGT ACAAGGTCGA CCTGGCGATC CTCGGTGGCG AACGGGAACT CTGCATGCCC GGCTACCGTC CGGAGACCGA GGAGGTCACC ACCCGGACCA ACTGCGTTGA CGACGAGACC GGTGCGGCCT ACTGGTATCC GTTGGAGCGG TTTCTGTCGG AGTGGAACCC CCACGCGGTC GTCGGCCAGT GGCGGGACAC CACCCACGGC CACTGGGTGC AGGACGAGGT CCCATCGGTC GTGGTCGAGG CGGTGAAGTC CGTCCACGCG GCGGCGGTCC GACCGTGA
|
Protein sequence | MSGMSRKFSV RLLVGSVVLA LAALAVATGG GELERDSRAT PEWERPFPVA ESVYPFPSEV YQWRGFAYHY VDVPPAAGGA PKGTVLAVHG NGTWSMIYRK IVDPLSAAGF RVILVDHLGF GFSDKPGTGE FDYMPSSHTT VLRDFIADLA LDDLYLVLQD WGGPIGLAAG VATPEKVRGL VLMNTWAWKL DHIEQGQTGF MHAVHDRGRH AQLEPEFYTQ GELIRRGAIG VAERNAVEGS AEYAALRDAM WGPYLTLDPP HELRYPEVSQ PVHISATATV ADGAFLDQLD RELATLRSKP VFFAFGDDTA FGPYKVDLAI LGGERELCMP GYRPETEEVT TRTNCVDDET GAAYWYPLER FLSEWNPHAV VGQWRDTTHG HWVQDEVPSV VVEAVKSVHA AAVRP
|
| |