Gene Strop_0665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0665 
Symbol 
ID5057106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp747829 
End bp749046 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content67% 
IMG OID640472932 
Productalpha/beta hydrolase fold 
Protein accessionYP_001157520 
Protein GI145593223 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.910637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGTA TGTCGAGGAA ATTCTCTGTT CGCCTCCTCG TGGGGTCGGT AGTACTAGCC 
CTCGCCGCCC TGGCAGTCGC CACCGGCGGG GGCGAATTGG AGCGAGACAG CAGGGCTACC
CCGGAATGGG AGAGGCCGTT TCCGGTCGCG GAGAGCGTCT ATCCGTTCCC GTCAGAGGTC
TACCAGTGGC GTGGGTTCGC ATACCACTAT GTGGATGTGC CGCCAGCGGC GGGCGGCGCG
CCCAAGGGTA CCGTTTTGGC GGTACACGGG AACGGCACCT GGAGCATGAT CTACCGGAAA
ATCGTCGACC CGTTGAGCGC GGCTGGCTTT CGGGTGATCC TGGTCGACCA CCTCGGTTTC
GGCTTCTCGG ACAAACCGGG GACCGGCGAG TTCGACTACA TGCCGAGTTC GCACACGACG
GTGCTGCGGG ACTTCATCGC CGACCTGGCC CTGGACGATC TCTACCTGGT ACTCCAGGAT
TGGGGCGGAC CCATCGGACT GGCCGCCGGA GTCGCCACCC CGGAGAAGGT GCGTGGTCTC
GTGCTGATGA ACACCTGGGC GTGGAAGCTC GACCACATCG AGCAGGGACA GACCGGATTC
ATGCACGCGG TGCACGACCG TGGGCGCCAT GCGCAGCTGG AACCAGAGTT CTACACGCAG
GGCGAGCTCA TCCGCCGCGG TGCGATCGGG GTCGCCGAAC GCAACGCGGT GGAAGGATCG
GCGGAGTACG CGGCACTGCG GGACGCGATG TGGGGGCCCT ACCTCACCCT GGATCCCCCG
CACGAGCTGC GCTATCCGGA GGTGAGCCAG CCCGTGCACA TCTCCGCCAC GGCGACCGTC
GCGGACGGCG CCTTCCTCGA TCAGCTCGAC CGCGAGTTGG CCACGCTGCG GTCGAAGCCG
GTCTTCTTCG CCTTCGGCGA CGATACGGCC TTCGGGCCGT ACAAGGTCGA CCTGGCGATC
CTCGGTGGCG AACGGGAACT CTGCATGCCC GGCTACCGTC CGGAGACCGA GGAGGTCACC
ACCCGGACCA ACTGCGTTGA CGACGAGACC GGTGCGGCCT ACTGGTATCC GTTGGAGCGG
TTTCTGTCGG AGTGGAACCC CCACGCGGTC GTCGGCCAGT GGCGGGACAC CACCCACGGC
CACTGGGTGC AGGACGAGGT CCCATCGGTC GTGGTCGAGG CGGTGAAGTC CGTCCACGCG
GCGGCGGTCC GACCGTGA
 
Protein sequence
MSGMSRKFSV RLLVGSVVLA LAALAVATGG GELERDSRAT PEWERPFPVA ESVYPFPSEV 
YQWRGFAYHY VDVPPAAGGA PKGTVLAVHG NGTWSMIYRK IVDPLSAAGF RVILVDHLGF
GFSDKPGTGE FDYMPSSHTT VLRDFIADLA LDDLYLVLQD WGGPIGLAAG VATPEKVRGL
VLMNTWAWKL DHIEQGQTGF MHAVHDRGRH AQLEPEFYTQ GELIRRGAIG VAERNAVEGS
AEYAALRDAM WGPYLTLDPP HELRYPEVSQ PVHISATATV ADGAFLDQLD RELATLRSKP
VFFAFGDDTA FGPYKVDLAI LGGERELCMP GYRPETEEVT TRTNCVDDET GAAYWYPLER
FLSEWNPHAV VGQWRDTTHG HWVQDEVPSV VVEAVKSVHA AAVRP