| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0621 |
|---|
| Symbol | |
|---|
| ID | 5057062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 702606 |
|---|
| End bp | 703439 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640472891 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001157479 |
|---|
| Protein GI | 145593182 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.600914 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTACA TCACCGTTGG GACCGAGAAC AGCACCAGCA TCGACGTGTA CTACGAGGAC
CACGGTCAGG GACAGCCGGT CGTGCTCATC CACGGCTACC CGCTGAGTGG GCACTCGTGG
GAGAAACAGG CCGCAGCCCT CCTTCAGGCC GGCTATCGGG TGATCACCTA CGACCGGCGG
GGGTTCGGCC AGTCCAGCCA GCCCACCGTC GGCTACGACT ACGACACCTT CGCCACCGAC
TTGAACACCA TCCTGGAGAC CCTGGACCTC ACTGAGGTGG TGCTGGTCGG CTTCTCGATG
GGCACCGGTG AGGTCGCCCG GTACCTGTCC CGGTATGGGT CGGCGCGGGT CGCGAAGGCC
GCGTTCCTGG CCTCGTTGGA ACCATTCCTG CTGCAGACCG ACGACAACCC GACCGGGGTG
CCGCAGGACG TCTTCGACGG GATCTCCGCC GCGGTCACCG CTGACCGGTA CGCCTACTTC
ACCGACTTCT ACCGCAACTT CTACAACACC GACGACACCC TCGGTACCCG CCTGTCCGAG
GAGGCACTGC GTAACAGCTG GAACGTCGCC GCGGGAGCGT CGTGGTACGC CGCCAGCGCG
GCGGTGCCGA CCTGGCTCAC CGACTTCCGC GCCGACATCC CGAAGATCGA CGTACCCAGC
CTGATCCTGC ACGGGACAGC CGACAAGATC CTGCCGGTCG ACGCTACCGC CCGCGAGTTT
CACAAGCGGC TACCCGAGGC TGACTACGTC GAGATCGACG GCGCCCCCCA CGGCCTGCTC
TGGACCCACA CGACCGAGGT CAACCAGGCC CTGCTGACCT TCCTCTCCAG GTAA
|
|---|
| Protein sequence | MPYITVGTEN STSIDVYYED HGQGQPVVLI HGYPLSGHSW EKQAAALLQA GYRVITYDRR
GFGQSSQPTV GYDYDTFATD LNTILETLDL TEVVLVGFSM GTGEVARYLS RYGSARVAKA
AFLASLEPFL LQTDDNPTGV PQDVFDGISA AVTADRYAYF TDFYRNFYNT DDTLGTRLSE
EALRNSWNVA AGASWYAASA AVPTWLTDFR ADIPKIDVPS LILHGTADKI LPVDATAREF
HKRLPEADYV EIDGAPHGLL WTHTTEVNQA LLTFLSR
|
|---|
| |