| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0607 |
|---|
| Symbol | |
|---|
| ID | 5057048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 687434 |
|---|
| End bp | 688051 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640472877 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001157465 |
|---|
| Protein GI | 145593168 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGATC GATCGATGAC CAGCGGCATC AACTACGTCG ACGAGCCAGA GCGCGTCGCC
GCCGCGCTGT CACCGCTACG CAGACAGCTC CTCGGCACAT TGCGGGTACC GGCCTCGGCG
ACACAACTCG CGACAAGCCT TCACATCCCC CGCCAGCGAG TGAACTACCA TCTGCGCGCG
CTCGAGGCGA TCGGCCTCGT CGAGCTGGTC GAGGAACGGC AGCGGCGGGG CTTCACAGAG
CGGATCATGC GGGCCAAGCC GGGCGCGCTC GTGGTCAACC CGACGCTGAT GGGTGTGGGC
GAGACCGTGC CAGAGCCCGA CGGCGCGCTC GCCGACCAAC ATGCGGCCGA ACACCTCGTC
AGAGTCGCTG CTGCAGCGGT GCGCGACGTC GCCCGCATGC AGGTCAAGGC TGACGAGCAC
GGCAAGCGCC TGCTCACGTT CACACTCGAG GCGCACGTGC GGTTCGCCGA CCCGGCCGCA
GTACATCGGT TCACCAAGGA GCTCACTGAG CTCGTGACGC AGCTGACGAC GACGTACGAC
ACCGAGGGCG GCCGTCCGTA CCGGATGGTC GCCGCCGGAT ACCCGGCACC GGCAACGGAG
GCACCAACGG ATCAATGA
|
|---|
| Protein sequence | MDDRSMTSGI NYVDEPERVA AALSPLRRQL LGTLRVPASA TQLATSLHIP RQRVNYHLRA
LEAIGLVELV EERQRRGFTE RIMRAKPGAL VVNPTLMGVG ETVPEPDGAL ADQHAAEHLV
RVAAAAVRDV ARMQVKADEH GKRLLTFTLE AHVRFADPAA VHRFTKELTE LVTQLTTTYD
TEGGRPYRMV AAGYPAPATE APTDQ
|
|---|
| |