Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0600 |
Symbol | |
ID | 5057041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 679659 |
End bp | 680552 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640472870 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001157458 |
Protein GI | 145593161 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACTG CCGACCAGTT ATGGCGACAA AGGGGAAACT GTTTAGAATG CGCTGAAGTC ACGAGGTGCA GCACCCTGGG GATGTGTCTT GACAATCCCA CCGACGCCGC TCGGCTAGAT TCCGTTACTC GGGCTGTCGA ATACATGACC GCCCATTTCT CGGAACCTCA GCGCCTATCC GACATAGCCC AGGCCGCGTT GCTCAGCCCG TTCCACTTCC ATCGGGTATT CCGGCACGTC ACATCCACCA CGCCGGCGCG ATTTCTGACC GCGCTGCGGA TGGCCCGAGC CCGGAGCATG CTGGTCAATT CGAACCTGTC GGTGACCGAG GTCTGTCTGG GCGTCGGATA CTCCAGCCTC GGCACCTTCA TCAGCCAGTT CACCAAGCTG ACCGGAATGT CGCCACGACG GTTCCGGGCG GCTATGTCCG TCTTCGGCCA TATCCGGTTG AGCGAGCTGA CCGATCCGTC CGCCGAGCGC CACTTCGCCC CGGGACCAGT CGGCGCCGTG ACCGGCGGGC CGAGCGCCGG CGGCTGTGCA GTGCTGGCAC TGTACCGGTC AGAGGAGCCC GACGATGTCC CAGTGACCTA CGGCGTACTG GAAACCAACC GCCTGAGCCA CTTCCGGCCG CTGGCAGACG GGGCGTACCA CGCCGTGGCG TTGGGCTTCG ACAACCGCTC AACGCTGTCC GACGTACTCG GCGACAACGG CCAGCAGGCG CAATTCGTCG GTACGGGCGA CGTGCCCATC GTCGTCCGCG GCGGACGCAC CCGCCGGAGC TTCCAGATCG CGCTGCGATG CCCGCGCCCC ATCGATCCTC CCGTGCAGCT CACCTCGGCC CTGCTCGCCC TGGCTCAGCG CAGGCAGCCA CGGCTGCTGG CAACGGGTAG CTGA
|
Protein sequence | MTTADQLWRQ RGNCLECAEV TRCSTLGMCL DNPTDAARLD SVTRAVEYMT AHFSEPQRLS DIAQAALLSP FHFHRVFRHV TSTTPARFLT ALRMARARSM LVNSNLSVTE VCLGVGYSSL GTFISQFTKL TGMSPRRFRA AMSVFGHIRL SELTDPSAER HFAPGPVGAV TGGPSAGGCA VLALYRSEEP DDVPVTYGVL ETNRLSHFRP LADGAYHAVA LGFDNRSTLS DVLGDNGQQA QFVGTGDVPI VVRGGRTRRS FQIALRCPRP IDPPVQLTSA LLALAQRRQP RLLATGS
|
| |