| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0590 |
|---|
| Symbol | |
|---|
| ID | 5057031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 663369 |
|---|
| End bp | 665141 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640472860 |
|---|
| Product | peptidase S9B dipeptidylpeptidase IV subunit |
|---|
| Protein accession | YP_001157448 |
|---|
| Protein GI | 145593151 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGGA TTGCTGGGGG TGGAGGCATC GCTGGGGCGG GGGTAAAGGG ATTCCGTCTA
CGACGACTCG CCGCCGATCC GAACGGTTCC GGGGACGGTG CCATAGCGCC CGACGGAACC
AGATTCGTCG CTTCGTCGAA ACGCAACGGC TCCGTCAATC TTTGGTTTTT CGACCTGAGC
TCGGGGAAAT GGCAGCAGGG AACGTGGGGA ACCGGTGACG ATATAGAGGC GCAGTGGTCG
CCGGACGGCC GGCAGCTGAC GTTCACCTCA TCTCGCGGCG GTCACAAGGC GATCTGGTTG
TACCGGCTGA GCGACGGACA AGTCCGGCAG CTGACGTCAG CCGACCACGA GGAGGAGTAC
CCCTCGTGGT CACCGGACGG AAGCACGGTC GCCTTCGTCG GCGGCTCGTG GGGCCGCCGG
CACTTTCTGG TGGTGCCCGC TACCGGCGGC ACGCCTCGCC CGGTGACCAC CAACCCGGGA
CGCGCCGGCG CCTGTTCATG GGCACCGGAC GGGCGATGGC TTGTCTGCCA CTCGTACGAC
ACCGGTGCAG GCGCAGTGTG GCTGCTCGAT AGCCAGACCG CAGAGGCAAT CCAGGTCACC
GACGGCTCGT CGTGGGACTA CAAGCCCACC ATCTGCCCAA CCCGGCCGGC GGTCGCCTTC
TCGCGAAGCA ACGAGGGGCG GTCCGTCATC TGGGTTCAAC GCCTCGGCGA CGGCACCGGC
GGCCCGCTTG TCGTCACCGG TGCGGACGAT CGCTGGCCCA CCTGGACGCG AGACGGAAAC
CACCTCTTCT TCCACCGGCT GGTAGACGAG GGGGCAGGCA TCGCGGTGTG GGACCGCAGA
ACGAGAGTCG TACGGGACCT CGTGCCGGCA GAGCACAAGC CCCGCTACGC GTCCTTCGCT
CCGGACGGAC GCCGGATCGT TTACGGCACT GAGGCCGGCG GCCGATCCAG GTTGCGGATT
CTGAACCTGG ACACCGGGAC TTCCCAGCCC CTACCAGCTG GCGAGGCCGC CTTCCCGACC
TGGTCCCCGG ACGGTCGGAC GATCGCATGC ACGGTTCGTC CCGACCCCAG CTCTCGATGG
GAGATCGCGA CTGTTGATGT GTCCAGTGGG CAGGTGCAGC TCTGGACAAC CGGCCGTACC
GACCTGCGGG GACTCCACGC GCCCGTCTCC TTCGCACCTG ACGGGCGGCG CCTGGTGTTC
CGCAGCGAGA CGGAACCGTT CGAAGCAAAC CTGCTCGTCC TGGATCTCAA CAGCGGCCGG
TTCACCAACC TCACCGAGGA CAGCTGGTGG GACGAGGCAC CGTCGTTTTC CCCCGACGGG
CGGAGCGTCA TCTTCATGTC CACCCGCGGT GGTGACTGGA CATGGGGCTT CTACCGCATC
GACCTGGACA GCAAGGAGAT CGTGACGGTC GCGGGCCCGG ACTACATCGA GCGCAACAAT
CCACAACTTA CCGTCGATGG TCGGGTCCTG TCGACGATGG TCGCCTCGAA GGTCGAAGAA
CTGTACGAAC AGTTGCCCGA TGGTGCCGGG CGTGTCGTGA CGGAGGCAGG ACCGGCAGTC
CGCTATCCCG TGCCGTCTGC CGACGGTGAA CAGGTCGTCT TCACCCGTAC CCGGACGACC
GTCGAGTACT GGCTCGCGGA AAACGTCTGG GCCGCCGACT CGCCTCTCGC CCCACTCGCA
CGACCCTTGG TCGCCGAAGC CGGGACGCCG CAGGTCATCG ACCAGCCACC GCTCGGCCCG
GTACGTAGCC CCGTCGATAC CCGACGCAGA TGA
|
|---|
| Protein sequence | MKRIAGGGGI AGAGVKGFRL RRLAADPNGS GDGAIAPDGT RFVASSKRNG SVNLWFFDLS
SGKWQQGTWG TGDDIEAQWS PDGRQLTFTS SRGGHKAIWL YRLSDGQVRQ LTSADHEEEY
PSWSPDGSTV AFVGGSWGRR HFLVVPATGG TPRPVTTNPG RAGACSWAPD GRWLVCHSYD
TGAGAVWLLD SQTAEAIQVT DGSSWDYKPT ICPTRPAVAF SRSNEGRSVI WVQRLGDGTG
GPLVVTGADD RWPTWTRDGN HLFFHRLVDE GAGIAVWDRR TRVVRDLVPA EHKPRYASFA
PDGRRIVYGT EAGGRSRLRI LNLDTGTSQP LPAGEAAFPT WSPDGRTIAC TVRPDPSSRW
EIATVDVSSG QVQLWTTGRT DLRGLHAPVS FAPDGRRLVF RSETEPFEAN LLVLDLNSGR
FTNLTEDSWW DEAPSFSPDG RSVIFMSTRG GDWTWGFYRI DLDSKEIVTV AGPDYIERNN
PQLTVDGRVL STMVASKVEE LYEQLPDGAG RVVTEAGPAV RYPVPSADGE QVVFTRTRTT
VEYWLAENVW AADSPLAPLA RPLVAEAGTP QVIDQPPLGP VRSPVDTRRR
|
|---|
| |