| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0495 |
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| Symbol | |
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| ID | 5056934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 573774 |
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| End bp | 574613 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640472768 |
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| Product | MIP family channel protein |
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| Protein accession | YP_001157358 |
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| Protein GI | 145593061 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGC GTGTGAGAGC GCCCGGACTC CTTGGAGAGT TGGCCGCCGA GTTCGCCGGC
ACCGCGATCC TGATTCTCTT CGGCGTGGGC GTCGTCGCCC AGGTCAATGC CGGTGGCACC
GGTGAGTTCG ACAGCATCGC CTGGGCCTGG GGCCTTGGCG TCGCGCTCGG CATCTACGTC
GCTGGCCGGA TCAGTGGCGC CCACCTCAAT CCCGCGGTGA CCCTCGCCCT CGCGGTGTTC
AAGGGCTTCT CGTGGCGCAA GGTGATGCCC TATGCCCTCG CACAGACCGC CGGGGCGTTC
GTCGCGGCCC TGATCATTCG CTGGAACTAC AGCGAGGTGC TGCAGCGGTT TGACCCGGGC
TTGACCAGCA AGAGCCAGGG CGTCTTCTCG ACTCTGCCGG GTGCTGGCAT CACTGAGTGG
GGCGCCCTGC GTGACCAGAT CATTGGCACG GCGATCCTGC TGTTTCTGAT CCTTGCCGTA
ACCGACGCCC GGAACTCTCT GCCCGGTGCC AACCTTGCCC CGCTGATCGT CGGCCTGATC
GTGGTCGCGA TTGGGATGGC GTTCGCCGTC AACGCCGGCT ACGCGATCAA CCCAGCCCGC
GACTTCGGCC CCCGCCTCGC GTCCTTCCTC ACCGGGTACG AGACGGCCTT CCTGGACCCG
AGCGGATATC CGTACTTTTG GGTGCCCATC GTCGGGCCGC TAGCCGGTGG TGTCATCGGC
GCCGGCCTCT ATGAGTTGTT CGTCGGCCGC TTCCTGCCGA GCGATGAGCC GCAGCCGGGC
GCGAACGGCA GCGAGACTGC GACCGAGACG GCTGCGGTGT CCGAGCGCGC CCGCCTCTGA
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| Protein sequence | MTQRVRAPGL LGELAAEFAG TAILILFGVG VVAQVNAGGT GEFDSIAWAW GLGVALGIYV
AGRISGAHLN PAVTLALAVF KGFSWRKVMP YALAQTAGAF VAALIIRWNY SEVLQRFDPG
LTSKSQGVFS TLPGAGITEW GALRDQIIGT AILLFLILAV TDARNSLPGA NLAPLIVGLI
VVAIGMAFAV NAGYAINPAR DFGPRLASFL TGYETAFLDP SGYPYFWVPI VGPLAGGVIG
AGLYELFVGR FLPSDEPQPG ANGSETATET AAVSERARL
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