Gene Strop_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0448 
Symbol 
ID5056887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp509438 
End bp511729 
Gene Length2292 bp 
Protein Length763 aa 
Translation table11 
GC content73% 
IMG OID640472721 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001157311 
Protein GI145593014 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.189205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CGAGCAGCCC GAAGCCGCGC GCCGTCAACC AGATCGAGTT GTCGATCGGC 
GGGATGACCT GTGCCTCCTG CGCCGCCCGC ATCGAGAAGA AGCTGAACCG GATGCCCGGC
GTCACCGCCA CGGTGAACTA CGCCACCGAG AAGGCCAGGG TCGCGTACGC CGACGGGGTG
ACATCGGACG ATCTGATCGC CACGGTCGAG AAGACCGGCT ACACGGCCGT CGTACCGCCC
CCACCGGCAG CCACGGCGGC GCCCGTCGCC GAGCCGGCCG ACGAATCGCG TGGGCTTGGT
ACCCGGCTCT GGGTATCGGC CGTGCTCACC GTGCCGGTGA TCCTGCTGGC GATGGTGCCG
CCCTGGCAGT TCACCTACTG GCAGTGGCTG TCGTTGACGC TGGCCGCCCC GGTGGTGGTC
TGGGGCGGCC TGCCGTTTCA CCGGGCCGCC TGGGTCAACC TCCGGCACGG CGCGGCGACC
ATGGACACGT TGGTGTCGCT GGGCACCCTC GCCGCGTTCG GTTGGTCGCT CTGGGCGCTC
TTCCTCGGCA CGGCTGGCGT GGCCGGCATG ACCCACCCGT TCAGCTTCGC CATCGTCCGG
GGCACTGGCG CGGGCAACAT CTACCTGGAG GCGGCGGCCG GCGTCACCAC CTTCATTCTC
GCCGGCCGAT ACTTCGAGGC ACGCGCCAAG CGCACCGCGG GCGCCGCCCT GCGCACCCTG
TTGGAGCTGG GTGCGAAGGA GGTGGCGGTG CTGCGCGGTG ACGTGGAGAC CCGCATCCCG
ATCGACCAGC TCGTGGTGGG GGACCGGTTC GTGGTGCGCC CCGGTGAGAA GGTCGCCACC
GACGGGATGG TGGTGGAGGG GAGCTCGGCG GTCGATGCCA GCATGCTCAC CGGTGAAGCC
GTGCCGGTCG AGGTCAAGGC CGGCGACGCC GTGGTGGGCG CCACCGTCAA CGCGGGTGGG
CGGCTGGTCG TGGCGGCCAC CCGGGTCGGT GGCGACACCC AGCTTGCCCA GATGGCCCGG
CTGGTGGAGG CCGCGCAGTC CGGCAAGGCG GCCGTGCAGC GTCTCGCCGA CCGGGTCTCC
GGGGTCTTCG TCCCCGTCGT GATCACCCTC GCCGCCGGCA CCCTGGGCTG GTGGCTGGGG
AGCGGAGCAG GCCCGACCGC CGCCTTCACC GCTGCGGTAG CTGTGTTGAT CATTGCCTGC
CCGTGCGCCC TGGGCCTGGC GACCCCCACC GCGCTGTTGG TCGGCACCGG TCGGGGCGCG
CAGCTCGGCA TCTTGATCAA GGGGCCGGAG GTGCTGGAGT CCACCCGGAC GGTGGACACG
GTCGTGCTGG ACAAGACCGG GACCGTCACC ACCGGCCGAA TGACCCTGGT GGACGTGGTC
GCGGCGAGCG GTGTGGAGCG GGCCGAGCTG CTCCGACTCG CCGGCGCCCT GGAGGCCGCC
TCGGAGCACC CGATCGCGCA GGCGGTCGCG GTGGGCGCGG CCGAGGCGGG ACCCCTGCCG
CCGGTAGCCG ACTTCGCCAA CCTCGAGGGG CTGGGCGTCG AGGGTGTGGT GGACGGCCAC
CGCGTGCTGG TCGGCCGGCC TCGACTGCTG CGGGAGCGGG GACTTCACGT ACCGGAGGAG
ATGGTGACGG CCGGCGCCAC GGCGCAGGCC GCCGGCGCGA CGGCGGTGCT GGTGGCCTGG
GATGGGCGGG CCCGCGGGCT GCTCGCGGTC GCCGACGTGG TCCGGCCGAC CAGCGCGCTC
GCGCTCCGAC AACTGCGGGA ACTGGGCCTG GACCCGGTGC TGCTCACCGG CGACAACGAG
ACCGTCGCCC GGGCGGTCGC GGCCGAGGTC GGGATCGACG AGGTGGTCGC GGAGGTGCTG
CCCGCCGAGA AGGTGGCGGT GGTCCAGCGG CTCCAGCGGG AGGGCCGGGT GGTGGCGATG
GTCGGTGACG GGGTCAACGA CGCCGCGGCG CTGGCCCAGG CCGACCTCGG GCTGGCGATG
GGTACCGGTA CGGATGTGGC GATCGAGGCG TCCGACCTGA CCCTGGTGCG GGGTGACCTG
ACCGCTGCCG TCGATGCCAT CCGGCTGTCT CGGCGGACCC TCGCGATCAT CAAGGGCAAC
CTGTTCTGGG CGTTCGCCTA CAACGTGGCG GCGCTCCCGC TGGCCGCGGC TGGTCTGCTC
AACCCGATGA TCGCCGGGGC TGCGATGGCC TTCTCCTCGG TCTTCGTGGT CGTCAACAGT
CTCCGGCTGC GGGGCTTCCG CCCGCTGGCC CCGGTCACGC AAGGACTCCG GTCTACCGGC
CACCCCCGGT AA
 
Protein sequence
MTTTSSPKPR AVNQIELSIG GMTCASCAAR IEKKLNRMPG VTATVNYATE KARVAYADGV 
TSDDLIATVE KTGYTAVVPP PPAATAAPVA EPADESRGLG TRLWVSAVLT VPVILLAMVP
PWQFTYWQWL SLTLAAPVVV WGGLPFHRAA WVNLRHGAAT MDTLVSLGTL AAFGWSLWAL
FLGTAGVAGM THPFSFAIVR GTGAGNIYLE AAAGVTTFIL AGRYFEARAK RTAGAALRTL
LELGAKEVAV LRGDVETRIP IDQLVVGDRF VVRPGEKVAT DGMVVEGSSA VDASMLTGEA
VPVEVKAGDA VVGATVNAGG RLVVAATRVG GDTQLAQMAR LVEAAQSGKA AVQRLADRVS
GVFVPVVITL AAGTLGWWLG SGAGPTAAFT AAVAVLIIAC PCALGLATPT ALLVGTGRGA
QLGILIKGPE VLESTRTVDT VVLDKTGTVT TGRMTLVDVV AASGVERAEL LRLAGALEAA
SEHPIAQAVA VGAAEAGPLP PVADFANLEG LGVEGVVDGH RVLVGRPRLL RERGLHVPEE
MVTAGATAQA AGATAVLVAW DGRARGLLAV ADVVRPTSAL ALRQLRELGL DPVLLTGDNE
TVARAVAAEV GIDEVVAEVL PAEKVAVVQR LQREGRVVAM VGDGVNDAAA LAQADLGLAM
GTGTDVAIEA SDLTLVRGDL TAAVDAIRLS RRTLAIIKGN LFWAFAYNVA ALPLAAAGLL
NPMIAGAAMA FSSVFVVVNS LRLRGFRPLA PVTQGLRSTG HPR