Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0443 |
Symbol | |
ID | 5056882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 505742 |
End bp | 506842 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640472716 |
Product | hypothetical protein |
Protein accession | YP_001157306 |
Protein GI | 145593009 |
COG category | [S] Function unknown |
COG ID | [COG3883] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTGCG TCCGCGCCAG CGGGAAGCAC GTCCAGCCCC AGCCCGTCAG CTCGCCGAGC CGGCGGTCAA CGGAAGGGAT CATTGTGACG GCACCCCCAC GCCGCTGGTT GACGCCGGTG GTGGCCGTGC TCACCGCGCT GGCCGTGCTC ACCGGGCCGA TACCGGCCTC GGCCACCCCC ACCTCCCCCC CGCTGCCCTC GGGGCACGAC GAGGAGCCGG AGCTACTCGG TGATCTCATC GAGGTCCGCA ACCGCGAGTA CGTCAAGGCA AAGGCCCAGC TGGCGGAGTC CGAGAAGCGC CAGGCCGCCC TCGAGAAGGA AATCGAGAAG GCGCAGGACG ACCTGGACGA ACTAGCCCCC CAGGTGGCGC AGATCGCGAC CCAGTCGTAC CGCACGGGAC GGGTCGGCGC GATATCGATG TTGCTGGAGG CAGACACCCC CGACTCCTTC ATCGTCCGGG CTACCGCGCT GGACGAGCTG AACCGCGTCA ACGACCAGCG CATCAAAGCA GTCAACACAA TCAAGATCCA CGCTGAGCAG TCGAAGGTGG CAGTCGACGA AGAGGTACGC AAGCAACAGA AGCTGAAAAG CGACCTCGAG CGCGGAAAGC TCGAGGCGGA GAAGGCCCTC CGCCTCGTCG GTGGCAACGG GCTCACCGGC GGCCTGGTTG ACGCCGAATC GCCGGTCGCC CGGGTCGCCC CGGGACGCAC CTCGGATGGC GACTGGCAGC CGCTGGGCTG CACCGAGGAT GACCCGACCA CCGGCGGCTG CATCACAGCG CGAACACTGC ACATGTACAA CGAGGTCAAG CGGGCCGGTT TTGACCGATT CGTCGGATGC TACCGCTCGG GTGGGCCGTG GGAGCACCCC AAGGGACGGG CCTGTGACTG GTCACTGCAG GACAGCGGGT TCCGCTCTTG GTACAACAAC GACATGCGCC TCTACGGCAA CAACCTGACC GCGTTCCTGG TCCGTAACGC CGACCGGCTC GGCGTCTACT ACGTGATCTG GAACCGGCAG ATCTGGTTCC CGGCAACCGG CTGGAAGTCG TACAACGGCC CGTCGAACCA CACCGACCAC GTCCACGTGT CGTTGCTGTA G
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Protein sequence | MGCVRASGKH VQPQPVSSPS RRSTEGIIVT APPRRWLTPV VAVLTALAVL TGPIPASATP TSPPLPSGHD EEPELLGDLI EVRNREYVKA KAQLAESEKR QAALEKEIEK AQDDLDELAP QVAQIATQSY RTGRVGAISM LLEADTPDSF IVRATALDEL NRVNDQRIKA VNTIKIHAEQ SKVAVDEEVR KQQKLKSDLE RGKLEAEKAL RLVGGNGLTG GLVDAESPVA RVAPGRTSDG DWQPLGCTED DPTTGGCITA RTLHMYNEVK RAGFDRFVGC YRSGGPWEHP KGRACDWSLQ DSGFRSWYNN DMRLYGNNLT AFLVRNADRL GVYYVIWNRQ IWFPATGWKS YNGPSNHTDH VHVSLL
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