| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0420 |
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| Symbol | |
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| ID | 5056859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 480160 |
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| End bp | 480738 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640472693 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001157283 |
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| Protein GI | 145592986 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.451277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGACTCT TCGTCGCCGT CTACCCGCCA CCGGCGGTGG TGGCGCACCT GAGTGCGCGA
ATCACCGAGC TGCGGATCGG CGAGGCCGCC GCCGCCGGCG TCGGTGTCCG CCTTGCCGAC
CCGACCCAGG CGCACGTCAC GCTCGCCTTC CTCGAACCGG TGGCAGCAGA CCGGCTGGAG
GCCGTGGAGC GCTCGCTCGA CCAGGCTGCC TGGCGGTTCC GCGACTCGGG GGCGGCCCCG
CCGCGGCTTC ACCTGGCTGG CAGCGGGACG TTCGGGCAGG GCCGCTCCAC GATCGTGTGG
GTAGACCTAC GGGGTGACGT GGCGGAGCTG CATCTGCTGG GCCGACTCGT CCGGTCCCGG
CTCCGGGCCA ACCACCTGTG CTACGACGAG AAGCCGTTGC GTCCGCACCT GACCGTGGCC
CGGCCCGGCG CCCGACTGCC GTCAGCCGAG GTGACGGCCG ATGTCGCGGC GCTCCAGGCC
TACCAGGGCC CCCAGTGGCG GGCGCGGGAA CTGGTGCTGA CCCGCAGCCA CCCGGGCCCG
CGCCCGAGCC ATGAGCGGGT GGCTGCCTGG CAGCTGTGA
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| Protein sequence | MRLFVAVYPP PAVVAHLSAR ITELRIGEAA AAGVGVRLAD PTQAHVTLAF LEPVAADRLE
AVERSLDQAA WRFRDSGAAP PRLHLAGSGT FGQGRSTIVW VDLRGDVAEL HLLGRLVRSR
LRANHLCYDE KPLRPHLTVA RPGARLPSAE VTADVAALQA YQGPQWRARE LVLTRSHPGP
RPSHERVAAW QL
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