| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0418 |
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| Symbol | |
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| ID | 5056857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 478259 |
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| End bp | 479539 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640472691 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001157281 |
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| Protein GI | 145592984 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.752628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGAAGA AGCTGAGCAC GATGTTCCAG TCCCTACAGG TCCGCAACTA CCGGCTATTC
GCCTCCGGGC AGCTGATCAA GTTGATCGGC GTCTGGATGA TGTTCATCGC CCAGGACTGG
CTCGTCCTCG AGCTCAGCGA CAACTCCGCC ACCGCGCTCG GTTTCGTCAC CGCCCTCCAG
TTCGCACCGG TTCTGCTGCT CACGCTGATC TCTGGGCGCC TCGCCGACCG GTACGACAAG
CGCGTTCTGC TCTTCGCCGC CAACCTGTTC TGGACGGTGC TCTCCCTGGC CATGAGCCTG
TTGGTGATCA CCGGCCTGGT GCAGCTCTGG CACGTCTTCG CCTTCGCTGC CCTCCTCGGC
GTCGCCAACG CGGTGGAAAC CCCGGTACGG CAGGCTTTCG TCTCCGAACT GGTCGGTACC
CCGCTGCTGC CGAACGCCCT CTCGCTCAAC GCGGCCACCT TCAACTCGGC GCGTATCGTC
GGCCCTGCCC TCGCCGGCCT GGCCATCGCC CTCGTTGACG TGGGGCCGGT CTTCCTGGCC
ACCGCCCTCA GTTCTATCGC GCCGCTGGTG AACGTGATCC GGATTCGTCC GGCCGAGCTG
CACCGCGAGG CGCTACCGCC GCGCGAGGAG CGGGCGTCGG CCCGGGTTGT CGACGGGCTG
CGCTACGTCT GGGGTCGGCC AGACCTGCTG CTGCCGATGG CCCTGATCTC GGTCATCGCC
ACCTCACTGT TCAACTTCCA GCTCACCCTC GCCGCGCTGG CCAAGACCGT CTTCGAAACC
GGAGCCGCCT CGTTTGGTCT GTTCAGCAGC GCCCTCGCGG TGGGCGCACT GGCCGGGGCC
CTCGCCGGCA CCGGGCGCCG TAGCCGCCCC TCGGTGTGGC TGGTGCTGTC CGCGGCCATC
GTCTGCGCCG TCTTCGGCAC CCTGGTCGGG CTCGCCCCCA CGTACTGGCT GGTGGTGGTG
CTGCTTCTGC CGACCGGTTT CTCCACGGTC TTCTTCGCCC AGGCCTGCAA CCAACGCATC
CAACTGGGCA CCGACGCCGC CTTCCGAGGC CGGGTCATGG CGCTGTGGGT GCTGGTCTTT
CTGGGTACCA ACCCGGTCGG CGCGCCGGTC ATCGGATGGC TCGCCGAGAC GTACGGCGCT
GGAGCCAGCA TCTGGATGGG CGGGCTTGTC TCCCTCGCCG CGGCTCTGCT CGCCCTGGCC
TGGCAACTGC GCCGTTCGGG AGCCCGGCTG CGGTTCCGGG TGCTACCGAT GCCCCGCTTC
TACCTCACCG AACGGATGTG A
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| Protein sequence | MQKKLSTMFQ SLQVRNYRLF ASGQLIKLIG VWMMFIAQDW LVLELSDNSA TALGFVTALQ
FAPVLLLTLI SGRLADRYDK RVLLFAANLF WTVLSLAMSL LVITGLVQLW HVFAFAALLG
VANAVETPVR QAFVSELVGT PLLPNALSLN AATFNSARIV GPALAGLAIA LVDVGPVFLA
TALSSIAPLV NVIRIRPAEL HREALPPREE RASARVVDGL RYVWGRPDLL LPMALISVIA
TSLFNFQLTL AALAKTVFET GAASFGLFSS ALAVGALAGA LAGTGRRSRP SVWLVLSAAI
VCAVFGTLVG LAPTYWLVVV LLLPTGFSTV FFAQACNQRI QLGTDAAFRG RVMALWVLVF
LGTNPVGAPV IGWLAETYGA GASIWMGGLV SLAAALLALA WQLRRSGARL RFRVLPMPRF
YLTERM
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