| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0389 |
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| Symbol | |
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| ID | 5056827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 448842 |
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| End bp | 450341 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640472661 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001157252 |
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| Protein GI | 145592955 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACG AAGAGGGGCT GCCCGCCCAC GGGCTGCCGG CGGAACGCGT TCTGGACGGA
ATCCGGGCAC TGCGTAGCGG GGACCGGCCC ACCCATGGCG GGCGACTGTT CGCGTACGTC
TACGACCCGG CGGTCCCCGG GCTGGATGAG CTGACCGCCG CCGCGCACGC GGAGAGCGCC
CACGTCAACG GGCTCGACCC GACGGCCTTT CCGTCTCTGC TCGCGATGGA GAACGCGTTG
GTCGGTGCCG CCGCCCAGCT ACTCGGTGGT GGCCCCGGAA CCACCGCGCC GGACGTGGTG
GGCTCGGTCA CCAGCGGGGG CACGGAGTCG CTGATCCTGG CGGTGAAGGC GGCCCGGGAC
GCCCATCCCG AGATCACCGA ACCCCGGATC GTGATGCCGG TAACCGCCCA CGCCGCGTTC
GTGAAGGCCG GCCACTACCT TCGAGTGGCC GTGGACATGG TGCCGGTGTC GGCGGAGACC
CTGCGCCCCG ACCCGGCCGC CATGGCCGCC GCGATCCGCC CCGAAACCGT GCTGGTCGTC
GCCTCCGCTC CGGGATACGC GCACGGGGTC ATCGACCCGG TCACCGAGAT CGCGGCGGTC
GCCGCCGACG CCGGGGTGCG CTGCCACGTG GACGCCTGCT TCGGCGGCTG GGCCCTGCCC
TGGCTACGCC GCCTCGGCGA ACCGGTGCCG GCGTTCGACT TCGCCGTACC CGGTGTCACC
TCGATCTCGG TTGACCTGCA CAAGTACGCG TACACCCCGA AGGGCGTGTC AATCCTGCTG
CACCGGGACC CGGAGCTGCG GAAGACGCAG TACTTCGCGC ACGCCGACTG GCCCGGCTAC
ACAATGATCA ATTCGGTGAT CGCCTCCACC CGGTCCGGCG GGCCGATCGC CGCGGCCTAC
GCGACCCTGC GTCACCTGGG TGAGGACGGC TACCTACGGC TGGCGGCGGT GACCCGGGAC
GCGATGAACG AGCTGGCGGA CGTCATCCGG GCCGCTGGCG GCCTGCGGCT CGTGGCCGAG
CCCGAGTCGA CCGTGATCTG CTTCACCGTG ACCGATCCGG AGCTGGACCT CTTCGTGCTC
GTGGACGAAC TGGCCGCGCG GGGCTGGCAC ACCCAACCGC AGCTCGCCTA CGCCGGCTTG
CCGCGCACCG TGCATCTGAC ATTGACCGCG TCAGTGGCGC CGGTGGTGGG CAAGTTTGGC
CCCGACCTGG CCGACGCTGT CGCGGCGACC CGGGCGGCCG GGCCGGTCAA GCTCCCCGCG
GAACTGCTCG CCCTCGCCCG ATCACTGACC CCGGAAGGGC TGACCCCGGA CCTGGTCGCC
GGCCTGGCCG CCGGGCTTGG TCTCGGTCTG GGCGAGGCGG CGGACGCCGG GGCCGAGCCG
GTGCCGGCCC GGATGGCCGT GGTGAACACC CTGCTCGAAG AGGTGCCGGC GGCGCTACAG
GAGCGTCTGC TCGTGGAGTT CGTCGGCCTG CTGCAACGAC CCACCTGGTC CCGCGACTGA
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| Protein sequence | MIDEEGLPAH GLPAERVLDG IRALRSGDRP THGGRLFAYV YDPAVPGLDE LTAAAHAESA
HVNGLDPTAF PSLLAMENAL VGAAAQLLGG GPGTTAPDVV GSVTSGGTES LILAVKAARD
AHPEITEPRI VMPVTAHAAF VKAGHYLRVA VDMVPVSAET LRPDPAAMAA AIRPETVLVV
ASAPGYAHGV IDPVTEIAAV AADAGVRCHV DACFGGWALP WLRRLGEPVP AFDFAVPGVT
SISVDLHKYA YTPKGVSILL HRDPELRKTQ YFAHADWPGY TMINSVIAST RSGGPIAAAY
ATLRHLGEDG YLRLAAVTRD AMNELADVIR AAGGLRLVAE PESTVICFTV TDPELDLFVL
VDELAARGWH TQPQLAYAGL PRTVHLTLTA SVAPVVGKFG PDLADAVAAT RAAGPVKLPA
ELLALARSLT PEGLTPDLVA GLAAGLGLGL GEAADAGAEP VPARMAVVNT LLEEVPAALQ
ERLLVEFVGL LQRPTWSRD
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