Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0376 |
Symbol | |
ID | 5056814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 432662 |
End bp | 434800 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640472648 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_001157239 |
Protein GI | 145592942 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAGG ATCGAACGGC GGTACGCGAG CAGGCTGAGA CGGTGCTGCG CCGGCTGGCC GGAGAGCACG CCCGGCTCCG CGACGACCAG TGGCGGGCGA TCGAGGCGCT GGTGGTCGAC CGACGGCGGG TACTCTGCGT CCAGCGCACC GGTTGGGGTA AGTCAGCGGT CTACTTCGTG GCCACCGCGC TGCTGCGGGC GCTCGGCACG CAGGGACCGA CGGTGATCGT CTCCCCGTTG TTGGCGTTGA TGCGCAACCA GGTCGAGGCG GCCGCCCGGG CCGGGATCCG GGCCCGGACC ATCAACTCCG CGAACCTTGA CGAGTGGGAC GAGGTCACCG GGGAGATCCA CGCCGGGGCG GTGGACGTGC TCCTGATCAG CCCAGAACGG CTCAACAACC CGGACTTTCG GGACACCGTT CTACCGAAGC TGGCCGCCAC CACCGGGCTG CTCGTGGTGG ATGAGGCGCA CTGCGTATCC GACTGGGGGC ACGACTTCCG CCCCGACTAT CGCCGGCTGC GGACGTTCCT CGGCAACCTG TCGGCCGGCA CGCCGGTGCT CGCCACCACG GCCACCGCCA ACGCCCGGGT CACCCAGGAT GTCGCCGAAC AACTCGGCGC GGCGTCCCGG CTCGGGGCGG GGCCCGAGGC CCTGGTGCTG CGAGGCAGCC TGGACCGGGA GTCCTTGCGG CTCGGCGTGG TCGACCTGCC CGGCCCGGCG TACCGGCTGG CCTGGCTCGC CGACCATCTG GACGAACTCC CCGGCTCCGG CATCATCTAC ACGTTGACGG TGGCTGCGGC GGCGGAAATC ACCGAGTTCC TCCGGTCCCG GGGCTACACC GTGGCCTCGT ACACCGGCCA GGCCGACGAT GCGGACCGTC GCGCCGCCGA GCAGGATCTC CTCGACAACA AGATCAAAGC ACTGGTGGCC ACGAGCGCGC TCGGGATGGG GTTCGACAAG CCCGACCTCG GGTTCGTGGT TCATCTCGGC GCGCCACCGT CGCCCATCGC GTACTACCAG CAGGTCGGCC GCGCCGGCCG GGCCGTCGCC CACGCCGAGG TGCTGCTGTT GCCCGGGGGT GCCGAGGACG CCGCGATCTG GCGATACTTC GCCGCACTGG CCTTCCCACC GGAGGATCAG GTGCGGTCGG TGCTGGCCGC TCTGCACACC GACCGTCCCC TCTCCACACC GGCGCTCGAG CCGATCGTGG ACCTGCGCCG TACCCGGTTG GAGCTGATGC TCAAGGTTCT GGACGTCGAC GGGGCGGTCC GTCGGGTACG CGGTGGCTGG ATCTCCACGG GTGAACCCTG GATCTATGAC GAGGCGCGGT TGCGACGGGT CGCGGCGGCC CGTACCGCCG AACAGGCGGC GATGCGGGAG TACGCGACCA CCTCCGCCTG CCGCCTCCGC TACCTACGGG AGTGCCTGGA CGATGCGGGG GCAACCGACT GCGGCCGGTG TGACCGGTGT GCTGCGCCGA CCTTCACCGA GGAGCTGTCC GATGGCGCCC TGCGAGCGGC CGAAGCATTC CTCGGCCGCT CCGGTGTCGG GATTTCCCCG AAAAAGCTCT GGCCGACCGG CCTTGCCGCG GTGGGTGTTC CACTCAAGGG GCGGATCGCC CTCCCGGAGC AGGCGCTGCC CGGTCGGGCC GTCGGGCGCC TCTCCGACCT CGGCTGGGGC GGGCGGCTGC GGGAACTCGT CGGGCCGGAC ACCGCCGACG TGGACGCGCC CGACGATGTG GTTGCCGCCG TGGTGGAGGT GCTCCGGGAG TGGGCGCACG GCACCGACCC CTGGCCGCGT CGCCCTGTCG GGGTGGTCGC GGTCGGCTCC CGCCACACCC GGCTGGTCGC CTCGCTCGCC GGGCGGATCG CCGCGGTGGG GCGGATGCCG CTGCTCGGCA CTGTCATGGT GTCCGCCGCG GGCGGGCCAC GCGGCAACAG CGCCCAACGG GTACGGGCCC TACACGGCTC GGTGGCCCTG CCGTCGGAGC TGGTCGGGGC CCTGGCCGGC CTGAGCGGGC CGGTACTGCT CGTTGACAAC CTCGTCGATT CGGGGTGGAC CATGACGATG GTGACACGGG AACTGCGTCG GGCGGGAGCG CCGGAGGTGC TTCCGCTCGC CCTGGCGGTC GCCGGTTGA
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Protein sequence | MGQDRTAVRE QAETVLRRLA GEHARLRDDQ WRAIEALVVD RRRVLCVQRT GWGKSAVYFV ATALLRALGT QGPTVIVSPL LALMRNQVEA AARAGIRART INSANLDEWD EVTGEIHAGA VDVLLISPER LNNPDFRDTV LPKLAATTGL LVVDEAHCVS DWGHDFRPDY RRLRTFLGNL SAGTPVLATT ATANARVTQD VAEQLGAASR LGAGPEALVL RGSLDRESLR LGVVDLPGPA YRLAWLADHL DELPGSGIIY TLTVAAAAEI TEFLRSRGYT VASYTGQADD ADRRAAEQDL LDNKIKALVA TSALGMGFDK PDLGFVVHLG APPSPIAYYQ QVGRAGRAVA HAEVLLLPGG AEDAAIWRYF AALAFPPEDQ VRSVLAALHT DRPLSTPALE PIVDLRRTRL ELMLKVLDVD GAVRRVRGGW ISTGEPWIYD EARLRRVAAA RTAEQAAMRE YATTSACRLR YLRECLDDAG ATDCGRCDRC AAPTFTEELS DGALRAAEAF LGRSGVGISP KKLWPTGLAA VGVPLKGRIA LPEQALPGRA VGRLSDLGWG GRLRELVGPD TADVDAPDDV VAAVVEVLRE WAHGTDPWPR RPVGVVAVGS RHTRLVASLA GRIAAVGRMP LLGTVMVSAA GGPRGNSAQR VRALHGSVAL PSELVGALAG LSGPVLLVDN LVDSGWTMTM VTRELRRAGA PEVLPLALAV AG
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