| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0313 |
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| Symbol | |
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| ID | 5056751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 365079 |
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| End bp | 366188 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640472585 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001157176 |
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| Protein GI | 145592879 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA TCGTCGGGGC GGTCTCTGTC GAAAGCATCG ACGAGGCCAG CCGGGATCAG
CCGGAGCCGG CGCACGCCGC GGCGGGTGTC CGGTCGGTGG CGGCGCACTA CGGGGACCCA
CTGCGCGAGC AGCGCACCCT GGAGACGGGG GTCGGCCTGG TCGACCGCTC GCACCGGGGG
GTGATCGCGG TGCCGGGCGA GGATCGGCTC GGTTGGTTGC ACACGCTCAC CACCCAGCAC
CTGGCGGATC TGCCCGATGG GCAGGGCACC GAGTTGCTGG TGCTCTCACC GCACGGGCAC
GTCGAGCAGC ACGCGATGGT CGCCGAGGAG GGCGGTACGA CCTGGCTGGA CACCGAGCCG
GGCGACACCG GTGGGCTGCT CGGGTATCTG GAGCGGATGC GCTTCTTCAG CAAGGTGGAG
CCGCGCGACG TGACGCCGGA CCACGCCCTG CTCTCGCTGG TCGGGCCGGC GGCGGTGGAC
GCCGTGGCGA CGCTCGGCGT GTCCGACCTG GCGGAGCCGG ACTTGCTCGA GGTGCCCGGC
CCGAAGTTCC GGGCGGGCTC GGTGCCGCCC CGGCCGACGG TGCGGTACGA CGTCCGTGCG
TTGCCGATCG GGGGCTGGGC CCGCCGTGGC CCGCTCGGCG TCGACCTGCT GGTGGCGCGG
GAGGGCATGG GCCGGGTGGT CGCCGAGCTG CGCGGCGCGG ATGTGCCGGT CGTCGGGCTC
TGGGCCTATG AGGCGGTGCG GGTGGCCGCT CGCCGGCCTC GGGTGGGGCT GGATACCGAC
CACCGGAGCA TTCCGGCGGA GGTGGACCTG GTCGGGCCGG CCGTACACCT GGAGAAGGGC
TGCTACCGGG GGCAGGAGAC GGTGGCCCGG GTGCACAACA TGGGTCGCCC GCCGCGTCGG
CTCGTCCTCC TGCACCTGGA CGGGGTGACC ACGGACCAGC CGCCGTCGGC CGGCACTCCG
GTGACTCGGG ATGGTCGGAC GGTCGGCTTC GTCGGTACCG CCGTGCACCA CCACGAGCTG
GGCCAGGTCG CCCTGGCGGT GGTCAAGCGC AACGTCCCCG ACGACGCCCG GCTGCTGGTC
GGAGAGACTG CCGCGATGAT CGATGGCTAG
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| Protein sequence | MIDIVGAVSV ESIDEASRDQ PEPAHAAAGV RSVAAHYGDP LREQRTLETG VGLVDRSHRG
VIAVPGEDRL GWLHTLTTQH LADLPDGQGT ELLVLSPHGH VEQHAMVAEE GGTTWLDTEP
GDTGGLLGYL ERMRFFSKVE PRDVTPDHAL LSLVGPAAVD AVATLGVSDL AEPDLLEVPG
PKFRAGSVPP RPTVRYDVRA LPIGGWARRG PLGVDLLVAR EGMGRVVAEL RGADVPVVGL
WAYEAVRVAA RRPRVGLDTD HRSIPAEVDL VGPAVHLEKG CYRGQETVAR VHNMGRPPRR
LVLLHLDGVT TDQPPSAGTP VTRDGRTVGF VGTAVHHHEL GQVALAVVKR NVPDDARLLV
GETAAMIDG
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