Gene Strop_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0299 
Symbol 
ID5056737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp340295 
End bp340534 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content61% 
IMG OID640472571 
Productregulatory protein GntR, HTH 
Protein accessionYP_001157162 
Protein GI145592865 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCGA CACCGGACTA CATCCGGATC TCCGACGAGA TCATTGATGA CATCAGGTCA 
GGCCGATACG AAGCGGGGGA CAAGCTGCCC TCGATCGCTC AGCTCTGCGA GCGGTACCAC
GTAAGCCCGT CCACGATCCA GCTCGTCAAC GTACGGCTGG AGGCGCTGGA GGTGATCAAC
CGTCACCAGG GCAAGGGTGT CTTCGTGACC GATCCGAAGA CGTGGCTCCG TAAGCCCTGA
 
Protein sequence
MPATPDYIRI SDEIIDDIRS GRYEAGDKLP SIAQLCERYH VSPSTIQLVN VRLEALEVIN 
RHQGKGVFVT DPKTWLRKP