| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0274 |
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| Symbol | |
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| ID | 5056712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 315328 |
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| End bp | 316527 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640472546 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001157137 |
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| Protein GI | 145592840 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4129] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.024335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG ACGGCGCCCG GATCGCGGCG ACGGTGCAGC GGCTGCGCCA TCGTGGTCAC
GCGACTCTCC AGGACCGTTT GCACCGGGTC CGCGCGACGT TGGTGCTCTC CGTCCAGGCC
GGACTCGCCG CCGGCATCTC CTGGCTGGTG GCGCATGAGC TGCTGGGCAG CCCCCAGCCC
GTCTTCGCGC CGATCTCGGC GGTCGGTACC CTCGCGGTCT CGGTCGGCCA GCGCTTCCGC
CGGACCGTGG AGCTGATCGT CGGGGTGGCG GTCGGCGTGG CGGTCGGCGA CCTTTTGATC
TTTTTGCTGG GCACCGGGCC GTGGCAGCTC TCTCTCGTGG TGACCTCGGC GATTCTGCTG
ACCGTCTTTG CCGGCGGGAG CGTCGCGATC CTGATTCAGG CGGCGGCGAC GGCTGTCCTG
ATCGTCACGC TCAGCCCGGC CGGGCACAAC CTGGAGATAC CGCGATTCCT CGACGCGTTG
ATCGGCGGTA GCGCCGCGCT ACTGGTGACC GCGCTGCTGT TACCGCTGAA CCCGGTACGG
GTGCTCAACC GGGCCGCTCG TCCGGCGTTG GATCTGCTCG CCGACCAGCT CGACGAGGCC
GCCGACGGGC TGCGAGAACG GGAACGGGAC AAGGTGCAAC ACTCGCTGGA GCAGCTCCGC
GATCACAAGG AGGAAGTGGC GTCGTTCGAC GAGGCGATCC AGGGCGCCAA GGAAACCGCC
ACGCTGTCTC CCGCGCGTTG GCACCGCCGG AACGAGCTGA CCCACTACGC GGAGGCGGCC
GATCCGATCG AACGGGCGAT TCGAAACGCC AGCACACTAA TCCGGCGTGC CATCACCCTG
ATCGAGGACG CGGAGCCGAT CCCCGAGCCG ATGCCGGCCT CGATGGGCCA CCTCGCCGAG
TCGGTACGGT TGCTGCGGCA CGAGTTCGCC GTCGGCGAGG AGCCGGAGCG GGCCCGCGAG
CGGTCGCTGC GCGCGGTCAG CGAGGCCGCG CAGGCGTACA CCGAGGGCGT GGGCTTCTCC
GGCAGCGTGG TGGTCGCCCA GGTGCGTACC ATCGCCAGCG ACCTGCTGGT CGCCTCAGGT
GTCTCCCAGG AGGAGGCGAA CCGCCTGGTC CGCGAGGCCT TCGGCGACCT GAAGCAGAAG
AAGCACGTGG AATCGGAGCA GCCCGAACGG AAGTCGGAGC CCCCGTCCAA CGGTGGCTGA
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| Protein sequence | MDIDGARIAA TVQRLRHRGH ATLQDRLHRV RATLVLSVQA GLAAGISWLV AHELLGSPQP
VFAPISAVGT LAVSVGQRFR RTVELIVGVA VGVAVGDLLI FLLGTGPWQL SLVVTSAILL
TVFAGGSVAI LIQAAATAVL IVTLSPAGHN LEIPRFLDAL IGGSAALLVT ALLLPLNPVR
VLNRAARPAL DLLADQLDEA ADGLRERERD KVQHSLEQLR DHKEEVASFD EAIQGAKETA
TLSPARWHRR NELTHYAEAA DPIERAIRNA STLIRRAITL IEDAEPIPEP MPASMGHLAE
SVRLLRHEFA VGEEPERARE RSLRAVSEAA QAYTEGVGFS GSVVVAQVRT IASDLLVASG
VSQEEANRLV REAFGDLKQK KHVESEQPER KSEPPSNGG
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