Gene Strop_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_0271 
Symbol 
ID5056709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp309210 
End bp311633 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content75% 
IMG OID640472543 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001157134 
Protein GI145592837 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00769668 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAGCCCG GACCCTGGCG AGCCCACCCC CTCCCGAGCC CGGCCAACCC ACCGCGGGCC 
AGCCCCGCGC CGGTGGTCGC CGCCGTCTTC GTCGGCCTGT GGATCGTCGG CCTCACCGTG
ATCACCCAGC TCGGCGGCTG GTTGACCGAC CAGCTCCTAC TCGTGATCGG CGTGGACCGG
CTGGTCTGGC TCTGGCCGGT GACCACCGTC GCGGTGGTGA CCCTGGCCGG ACTCCCCACC
CTGCTGCTCG CCCTGCTGCC CCGCTCCCGC GTGGTCCGCG CCGTCGGCCA GCTCTGGCTG
GTGGGTCTGC TGGTGTTCGG CGCGCTGAGC CTGCCGCGGG CGCTGCCGCC GGTGCAGCAT
GAGGCATATC TGGCAACCCT CGCCGGTACG GCCGGGCTGG CCACGCTGCT CATCCACCGG
CTTGTCGCCC ACCGGATCGC GCCGACTGGC CCGGAAGGCG AGTCGGACCG GCACCGGCGG
CGCGCCCCAC GCCCCGCCTC GGTGACGCTG CTCGGGCTCG CGGGCGGGCT GGCCCTGCTG
CTGCCGTGGG TCTGGGTCGG CGCGCTCGGT GGGCTGCTGG AGACGCTGCT CGCCGTACTC
GCCGCCACGG CCGTCGGCGG GCTGGCAGCC GCGCTCCTGC CTGCTGCGTT CTGGCCCCAC
CGCACCGCCG ACACTCCACC CCGACCAGTC CGACTGGTGC TGGTGGGCGG CCTGGTCGCC
GGCGTCGTTC TGCTGCTGCT CGGGGCGGGA GTCGGGCAGT CCGGTGCCCA GCTACCGCTG
CTGTTGACAC TGCCGCCGGC CGGGTTCGCG CTGGCGGCCT TGGCCGTCGC CGCCCGGCGG
ACGGCGACCG GCGTCGGGGC CGCCGCCGCC GGGCTGGTCG GGCTGAACGT CTTCGGCCCG
CTCGCCTGGA CCGACCCGGA GGAGGTCAGC CTGGTGCTGG CCGACCCCCG GGACGTGCCC
TTCTGGGTGG CGGTCGCCGC TGGTGTCGGC TTCACGATCG CGGTCCTCCT CGCCATCGGC
TACGGGGTGA CGCTCGTCCG ACGTCCCGCC GCCCGGCCCA GTCGGACGGT GGCCGGGATG
GTGGCGGCCA CCCTGCTGGT GACGACCGCG GCGGTAGCTG TCGGGGCGGG GCAACCTGGG
CTGCACGGTG AACGGCTCCT CGTGGTGCTC CGGGAGCAGG CTGACCTGAG CGGCGTGCCC
GCCGCCACCG GCCGGGCCGG TCGCGACCGC CGGGCCGCCG AGGTCTACCG GCGGCTGGTG
GAGACCGCCG AGCGGACGCA GGCCGGCCTG CGTCGCGAGC TGCGCCGGTT CCGGCTGGAC
CACACGCCCT ACTACCTGGT CAACGCGATC GAGGTCGACG GCGGGCCGCT GGTACGGGCC
TGGCTGGCGG GCCGTCCCGA GGTGGATCGG GTGCTGGTCA ACCAGCGGGT CCGCCCACTG
CCCGCGCCCG CCCCCGTCGT ACCGGGGGAC GCCCCACCAC CGCGGGGCGC GGAGTGGAAC
ATCCGGCTGA TCCGCGCCGA CCGGGTCTGG TCGGAGCTGG GAATCACCGG TACCGGGGTG
ACCGTGGGCA GCTCCGACTC GGGGGTGGAT GGCAACCACC CGGCGTTGGG AGCCGGCTTC
CGCGGCGGGG ACGACTCGTG GTTCGACCCC TGGAACGCCA CCTCGGCCCC GCGGGACCGG
AACGGGCACG GCACCCACAC GCTCGGTAGC GCGGTCGGTC GCGACGGGGT CGGGGTCGCC
CCCGGGGCCA CCTGGACCGG CTGCGTCAAC CTGGACCGCA ACCTCGGCAA CCCCGCGCTC
TATCTGGACT GCCTCCAGTT CATGCTGGCG CCCTTCCCGA GCGGCGGGGA TCCGTTCCAC
GACGGTCGTC CACAGCGCGC GCCGGAGATC ATCACCAACT CGTGGAGCTG CCCCCCGCTG
GAGGGCTGTG ATCTCGGGGC GCTCCAGCCG GCCGTTGCCG CGCTGGCAGC CGCGGGGATC
CTGGTCGTGT TCGCCGCTGG CAACTCCGGG CCACGCTGCC GCTCGATCGA GGATTCCCCG
ACCGCCGATC CGGAGGTCCT GACCGTCGGC GCGGTCGACC GGCAGCGACG GGTTACCGAC
TTCTCCGCAC GGGGTCCGGT GCCCGGCGAC GGCGCCAAGC CGGACCTGGT CGCCCCCGGC
GGCGATGTGC TCAGCGCGTT GCCGGGTGGC GGATATGGCG TGTTCAGCGG CACGTCGATG
GCGACTCCTC AGGTGGCCGG GGTGGCGGCG CTGATGTGGG CGGCAAATCC GGCGTTGATC
GGGGATCTAC CTCGGACGCG ACAGATCCTG ACCGAGACCG CCACCGCAGT GCGGGTCAGC
GGCGACCGCT GTGGCGACGA GGCGCATGTC GCGGGTGCCG GCCTGGTGGA CGCGTACGCC
GCCGTCCGCG CCGCCCAGGG CTGA
 
Protein sequence
MQPGPWRAHP LPSPANPPRA SPAPVVAAVF VGLWIVGLTV ITQLGGWLTD QLLLVIGVDR 
LVWLWPVTTV AVVTLAGLPT LLLALLPRSR VVRAVGQLWL VGLLVFGALS LPRALPPVQH
EAYLATLAGT AGLATLLIHR LVAHRIAPTG PEGESDRHRR RAPRPASVTL LGLAGGLALL
LPWVWVGALG GLLETLLAVL AATAVGGLAA ALLPAAFWPH RTADTPPRPV RLVLVGGLVA
GVVLLLLGAG VGQSGAQLPL LLTLPPAGFA LAALAVAARR TATGVGAAAA GLVGLNVFGP
LAWTDPEEVS LVLADPRDVP FWVAVAAGVG FTIAVLLAIG YGVTLVRRPA ARPSRTVAGM
VAATLLVTTA AVAVGAGQPG LHGERLLVVL REQADLSGVP AATGRAGRDR RAAEVYRRLV
ETAERTQAGL RRELRRFRLD HTPYYLVNAI EVDGGPLVRA WLAGRPEVDR VLVNQRVRPL
PAPAPVVPGD APPPRGAEWN IRLIRADRVW SELGITGTGV TVGSSDSGVD GNHPALGAGF
RGGDDSWFDP WNATSAPRDR NGHGTHTLGS AVGRDGVGVA PGATWTGCVN LDRNLGNPAL
YLDCLQFMLA PFPSGGDPFH DGRPQRAPEI ITNSWSCPPL EGCDLGALQP AVAALAAAGI
LVVFAAGNSG PRCRSIEDSP TADPEVLTVG AVDRQRRVTD FSARGPVPGD GAKPDLVAPG
GDVLSALPGG GYGVFSGTSM ATPQVAGVAA LMWAANPALI GDLPRTRQIL TETATAVRVS
GDRCGDEAHV AGAGLVDAYA AVRAAQG