| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0223 |
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| Symbol | |
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| ID | 5056661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 253327 |
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| End bp | 254829 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640472495 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001157086 |
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| Protein GI | 145592789 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.677245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCAC CCTCCCTTCG GCTGGGCACC CCCGCGGGGG CCGGCACGCT GCTCGCCGCG
GTGCTCGCCT CCGGCATGGT CTTCCTCGAC GGCACCGTGG TCAACGTGGC GCTTCCCCGC
CTCGGCGACG AACTCGACGC CACCGTGTCC GACCTACAGT GGACGGTCAA CGGCTATCTG
CTGATGCTCG CCGCGTTCGT GCTGCTCGGT GGCGCGCTCG GGGACCGCTT CGGCCGGCGG
CGCGTCTTCC TCCTCGGGGT GGTGTGGTTC ACCGTGGCGT CGGTGCTGTG CGGGCTGGCC
CAGGACACCG GGCAGCTCAT CGCGGCCCGG CTTCTGCAGG GTGCTGGAGC GGCCCTGCTC
ACCCCCGGGT CCCTGTCGGT CCTGCAGGCC AGCTTCCACC CGGACGACCG GGGACGGGCG
ATCGGTGCCT GGGCTGGCTT CTCCGGCGTC TCCACCGCAC TCGGCCCCTT CGTCGGCGGC
TGGCTGATCG ACGAGTTCTC CTGGCGGTGG ATCTTCTTTC TCAACGTGCC GTTGGCGGCG
CTGGTGGTGC TGGCCGCCCT GAGGTGGGTG CCGGAGAGCC GGGACGAGAG CGTCTCGCGT
ACCAGGACCG AGGGGGCGGG CCGGCGCCGG TTCGACGTGC TCGGCACGGT GCTGGGCGCG
GTCGCCCTGG CCGGGATCAC GTTTGCGTTG ATCGACGCGC CGGCGCGGGG CGCGACGTCT
CGAGTGGTGC TGCTCGCGGC CGCGGCCGGG GTGCTCGGTT CGGTGGCCTT CGTACTGGTC
GAGCGACACC GGGGGGAGAC CGCGATGCTG CCGACCGGGC TGTTCACCAG CCGACTCTTC
TCCGTGCTCA ACGTCTTCAC CGTGGTGATC TACGCGGCGC TCAGTGGGTT CACCTTCTTC
GTCGCCGTCT TTCTCCAGAA CGTGGCCGGC TGGTCGGCGC TGGGTACCGG TGTCGCGCTG
CTGCCGGTGA CCGTGCTGCT GCTGGTCGGC TCGCCGGTCG CCGGTGACCT GGCGACCCGG
ATCGGGCCGC GGTTGCCGTT GACCGTGGGG CCGGTGGTGT CCGCCATCGG GCTGCTCCTG
CTCCGCGAGG TCGGGGCGGA GGCGTCGTAC TGGCGCGACG TACTGCCCGG GGTGTTTCTC
TTCGGGCTCG GGCTGGCCAT GGTGGTGGCG CCGTTGACGG CCTCGGTGCT GGCCGCCGTC
GAGGACCGCT TCGCCGGAGT CGCGAGTGGC TTCAACAATG CCGCCTCGCG CGCCGGGGGG
CTACTCGCCG TGGCCGCTCT GCCGCTGCTG GTTGGCCTCT CCGGCACCGA ATACGAACGG
CCGGACGAGT TGACCGCCGC CTACCGGGGA GCGTTGGCCT GGTGCGCCGC GCTGCTGCTG
ATGGGGGCGG TGCTGGCTGT GGTCTTCGTG CGCCGTCCGC GCCGGGCACC GCCGCCGTCG
CAGCCCTGCC AGTCCCTGCC GGCCGCCACC GGGCCGGAAA AGGGTGCGGA GACCACCTCC
TGA
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| Protein sequence | MTPPSLRLGT PAGAGTLLAA VLASGMVFLD GTVVNVALPR LGDELDATVS DLQWTVNGYL
LMLAAFVLLG GALGDRFGRR RVFLLGVVWF TVASVLCGLA QDTGQLIAAR LLQGAGAALL
TPGSLSVLQA SFHPDDRGRA IGAWAGFSGV STALGPFVGG WLIDEFSWRW IFFLNVPLAA
LVVLAALRWV PESRDESVSR TRTEGAGRRR FDVLGTVLGA VALAGITFAL IDAPARGATS
RVVLLAAAAG VLGSVAFVLV ERHRGETAML PTGLFTSRLF SVLNVFTVVI YAALSGFTFF
VAVFLQNVAG WSALGTGVAL LPVTVLLLVG SPVAGDLATR IGPRLPLTVG PVVSAIGLLL
LREVGAEASY WRDVLPGVFL FGLGLAMVVA PLTASVLAAV EDRFAGVASG FNNAASRAGG
LLAVAALPLL VGLSGTEYER PDELTAAYRG ALAWCAALLL MGAVLAVVFV RRPRRAPPPS
QPCQSLPAAT GPEKGAETTS
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