| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0216 |
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| Symbol | |
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| ID | 5056654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 246131 |
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| End bp | 247792 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640472488 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001157079 |
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| Protein GI | 145592782 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.923383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCAT CCAGGCCGAA GGTCGCTGTC GCGGCCGTCG CGGTCGCGGC CCTCGCGGTA
GCCGGCTGCG CCGAGAGCGA CCGCGAGGAT TCCGGTGGTA GCAACAACGA CACCCTCGTC
TTCGGCGTCG CCGGAGACCC GAAGGTGCTC GACCCGAGCT TTGCCAGCGA CGGCGAGTCG
CTGCGCGTGG CCCGTCAGGT CTTCGAGACC CTGGTCCGCC CCGAGGAGGG TGGCACCAAG
GTGAGCCCGG GCCTCGCGGA GTCCTGGACT CCGGACGAGG CGGGCACCAC CTGGACCTTC
AAGCTCCGCT CGGGCGTGAA GTTCCACGAC GGCACCGACT TCGACGCCGA GGCCGTCTGC
GTCAACTTCA ACCGTTGGTA CAACGCCACC GGCCTCATGC AGAGCCCGGA CGTGACCGCC
TACTGGCAGG ACGTGATGGG CGGCTTCGCC CAGAACGAGG ACGAAGGGCT CTCGGAGAGC
CTCTTCAAGT CCTGCACCGC CAAGGACGCC ACCACGGTCG ATCTGACCTT CACCCGGGTG
TCCAGCAAGA TCCCGGCCGC CCTGATGTTG CCGTCGTTCT CCATCCACAG CCCGACGGCG
CTGGAGCAGT ACGACGCGAG CAACGTCGGC GGCACCGCGA CGGACGTCCA GTACCCCGAG
TACGCGACCG CGCATCCGAC CGGCACCGGG CCCTTCAAGT TCAAGTCCTG GGACATCGCC
AACAAGTCGC TCACCATCGA GCGAAACGAC GACTACTGGG GCGAGAAAGC CAAGCTGAAG
ACCCTCATCT TCCGGACCAT CCCGGATGAG AACGCGCGCA AGCAGGCGCT GAGCTCCGGC
GACATCCAGG GCTACGACCT GGTCGGGCCG GCTGATGTCG AGCCGCTGAA GGGCGAGGGC
TTCAACGTCC TGACCCGGCC GGCGTTCAAC ATCCTCTACC TGGGCATGAA CCAGCAGGGG
AACCCGAAGC TGGCTGACCT CAAGGTCCGG CAGGCGATCG CCCACGCGAT CAACCGGCAG
GCCCTGGTCG ACTCCAAGCT CCCCCCGGGT GCGAAGGTCG CGACCAACTT CTTCCCGGAC
ACGGTCGAGG GGTGGAACGG CGACGTCACC ACCTACGACT ACGACGTCGA CAAGGCCAAG
CAGCTGCTGG CCGAGGCCGA CGCGACGGAC CTGACGCTGC GGTTCCACTA CCCGACCGAG
GTCACCCGTC CGTACATGCC GAACCCGAAG GATCTCTTCG AGCTGGTCTC GGCGGACCTC
CAGGCGGCCG GCATCACGGT CGAGCCGATT CCGCTCAAGT GGAGCCCGGA CTACCTCAAC
GCCACCACCT CCGGTAGCGA GCACGACCTG CACTTCCTCG GCTGGACCGG TGACTACGGC
GACGCCTACA ACTTCATCGG CACCTTCTTC GACCGGCAGA AGGACGAGTG GGGCTTTGAC
AACCCGGCCC TCTTCGAGCA GTTCCAGGAC GCCGACTCCA CCGCGGATAT GGCGTCACGG
GTGGAGAAGT ACAAGGGTCT GAACAAGACC ATCATGGACT TCCTGCCCGG GGTGCCGATC
TCGCACTCGC CGCCGGCGAT CGTGTTCGGC AAGGACGTCA CCGGCATCAA GGCCAGCCCG
CTCACCGACG AGCGGTTCGC GAAGGCTGAG TTCACGTCCT GA
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| Protein sequence | MRASRPKVAV AAVAVAALAV AGCAESDRED SGGSNNDTLV FGVAGDPKVL DPSFASDGES
LRVARQVFET LVRPEEGGTK VSPGLAESWT PDEAGTTWTF KLRSGVKFHD GTDFDAEAVC
VNFNRWYNAT GLMQSPDVTA YWQDVMGGFA QNEDEGLSES LFKSCTAKDA TTVDLTFTRV
SSKIPAALML PSFSIHSPTA LEQYDASNVG GTATDVQYPE YATAHPTGTG PFKFKSWDIA
NKSLTIERND DYWGEKAKLK TLIFRTIPDE NARKQALSSG DIQGYDLVGP ADVEPLKGEG
FNVLTRPAFN ILYLGMNQQG NPKLADLKVR QAIAHAINRQ ALVDSKLPPG AKVATNFFPD
TVEGWNGDVT TYDYDVDKAK QLLAEADATD LTLRFHYPTE VTRPYMPNPK DLFELVSADL
QAAGITVEPI PLKWSPDYLN ATTSGSEHDL HFLGWTGDYG DAYNFIGTFF DRQKDEWGFD
NPALFEQFQD ADSTADMASR VEKYKGLNKT IMDFLPGVPI SHSPPAIVFG KDVTGIKASP
LTDERFAKAE FTS
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