Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0197 |
Symbol | |
ID | 5056633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 228612 |
End bp | 229682 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640472467 |
Product | hypothetical protein |
Protein accession | YP_001157060 |
Protein GI | 145592763 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCCGGGT ATCTTGCTTT GGCCGCGATC TGGGGTTCCA GCTTTCTCTT CATCAAGATC GGGGTGCGGG AGCTACATCC CCTGCACCTG ACCCTCTACC GGGTCGGGGC CGGCGCGTTA ACGCTGCTGA TACTGCTCGT GGCGCTGCGC GACCGACTGC CCCGCGAGCC GCGGGTCTGG GCCCATCTGG TCGTCACCGG TGGGATCGGC GTGGCGCTTC CGTTCACCCT GTTCGGCTAC GGCGGGGAGC GGGTCGAGTC CATGCTCTCC GGGATCTGGA ACGCCACCAC ACCGCTGGTC GTGCTGCCCA TGGCGGTGCT GGTCTTCCGT ACCGAACGGA TTACCGCCGC CCGGGCGGTC GGGCTCGGGC TGGGCTTTCT CGGCGTACTG GTGGTGCTCG GGGTGTGGCA GGGCGCTGGT GGTTCGCACT TCGTCGGCCA GCTCATGTGC TTCGGCGCCG CGGCCTGCTA CGGGGTGGTC ATCCCGTACC AGAAGAAGTT CGTCGCGGGC CGCTCCTACT CCGGGCTGGC CCTGTCGGCG GCGCAGTTGC TGATGGCGCT GGCGCTGCTC ACCATCGTCA CTCCGTTCGT GGCGGGCGTA CCGCCGATGC CGACCGCCCT CTCCGGCTCG GTCCTGGCCA GCATGGTCGC GCTCGGCGCG CTCGGCACCG GGTTGGCCTT CCTGATTCAC TTTCGCAATA TCCGGGTCGC TGGCGCCAGT ACCGCAGCGA CGGTGACCTA CGTGATCCCG GTCTTCGCGG TGCTGGCCGG TGCGCTGGTG CTCGACGAGC GGCTGACCTG GCACCAACCG GTTGGCGCGG TGGTGGTCCT GCTCGGTGTC GCGGTCACCC AGGGGCTGAT CGGTCCCCGC CGCCGACCGC GGGCCGTCGC GCTACCGACC TCGGCAGCCG GCACCTCCGC CTCGGCGGCG GGAGTGCCGG CCACCGCCGA TCAGGAGCTG CTCCCAGCCC ACGCCACCAG CCGCTCCGCC GGCCAGGCAT TGACCACCCG ATCGGCAGGG ACGCCGCAGC GGGCGGCGCG TTCGCAGCCG AACCGTTGCC AGTCGAGCTG A
|
Protein sequence | MPGYLALAAI WGSSFLFIKI GVRELHPLHL TLYRVGAGAL TLLILLVALR DRLPREPRVW AHLVVTGGIG VALPFTLFGY GGERVESMLS GIWNATTPLV VLPMAVLVFR TERITAARAV GLGLGFLGVL VVLGVWQGAG GSHFVGQLMC FGAAACYGVV IPYQKKFVAG RSYSGLALSA AQLLMALALL TIVTPFVAGV PPMPTALSGS VLASMVALGA LGTGLAFLIH FRNIRVAGAS TAATVTYVIP VFAVLAGALV LDERLTWHQP VGAVVVLLGV AVTQGLIGPR RRPRAVALPT SAAGTSASAA GVPATADQEL LPAHATSRSA GQALTTRSAG TPQRAARSQP NRCQSS
|
| |