Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0193 |
Symbol | |
ID | 5056629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 222995 |
End bp | 224191 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640472463 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001157056 |
Protein GI | 145592759 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCGCT TTCCCGCCAC CGCCGGACAT GTACTGTTCC TCAACTGGCG GGACACCCGG AACCCCGAAG GTGGTGGATC CGAGGTGTAC GTCGAGCGGA TCGCCGCGGA GCTGGTTGCC CGCGGCTTCC GCGTCACGCT GTTCTGCGCC GCACATCGTC GGGGCCGTCC CGAGGAGGTC AATGACGACG GAGTCCGGCT GATCAGACGG GGCGGGCGCC ACACCGTGTA CCTGTGGGCC GCGCTCTGCT ACCTGGCCGG CGCACTCGGG TTCGGCCCCC TGTCCCGCCG ACACGGCCCC CGACCGAAGG TGCTCGTCGA CGTCTGCAAC GGTCTACCGT TCATGACCCC GCTATGGGCC CGACGACCGA TTATCAAGCT AATCCACCAC ATTCATCGAG AACAATGGTG TGTGGTACTT CCACCTTGGG CAGCCCGGTT TGGCTGGTGG GTGGAGTCAT CATTCGCCAT ACGCGCCTAC CGGCGCTGCC ACCACGTCAC GGTCTCCGAA GCCACCCGTC AGGAGCTGGT CCAGCTCGGT GTACCCGCGG GTCAGGTCTC CGTGGTGCAC AACGGCACCC CGCCGCTCCC ACACACTGAC GCCGAACGTG CACCCTCCCC ACTGCTCGTC ACGCTCAACC GGCTGGTCCC ACACAAGCGC GTCGAGGTGG CACTACGGGC GGTCGCCACC CTCGCCGACG AGCTGCCCCA GCTACGGCTG GTGGTCGCCG GACAGGGCTG GTGGGAGGGG CGGCTCCGCG AGGTCGCCAA CGACCTGGGC ATCACCGGCC GAGTGGAGTT CCGGGGGTTC GTGACGGAGG AGGAGAAGGC GACCCTCCTC GCCTCAGCCT GGGTGGCGCT GACCCCGTCA CTGAAGGAAG GGTGGGGTCT GACCATTGTG GAGGCCGGAT CGGCCGGCAC CCCGACGGTC GCGTTCCGGA GCGCGGGCGG CGTGGGGGAG GCGGTGGTGG ACGGCCAGAC CGGACTTCTC GCCGACGACA TCGACGACTA CGTGGCGAAG GTGCGGTCCC TCCTCCACAA CGCCGAGCTA CGGCACCAGC TGGGTGCGGC GGCCCGGGAG CACGCGGCGA ACTTCACCTG GCCCGCCGCC GGAAGCCACT TCGCGGCCGT GCTGGAGAGT GTGGAGTCGC CCCGTCATCC GGATTCACGG GGCGCCCCGT CCTACCTGCT GCCGTAG
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Protein sequence | MERFPATAGH VLFLNWRDTR NPEGGGSEVY VERIAAELVA RGFRVTLFCA AHRRGRPEEV NDDGVRLIRR GGRHTVYLWA ALCYLAGALG FGPLSRRHGP RPKVLVDVCN GLPFMTPLWA RRPIIKLIHH IHREQWCVVL PPWAARFGWW VESSFAIRAY RRCHHVTVSE ATRQELVQLG VPAGQVSVVH NGTPPLPHTD AERAPSPLLV TLNRLVPHKR VEVALRAVAT LADELPQLRL VVAGQGWWEG RLREVANDLG ITGRVEFRGF VTEEEKATLL ASAWVALTPS LKEGWGLTIV EAGSAGTPTV AFRSAGGVGE AVVDGQTGLL ADDIDDYVAK VRSLLHNAEL RHQLGAAARE HAANFTWPAA GSHFAAVLES VESPRHPDSR GAPSYLLP
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